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芍药科(芍药属)叶绿体全基因组的特征及系统发育分析

Characteristics and phylogenetic analysis of the complete chloroplast genome of (Paeoniaceae).

作者信息

Lim Seo-Young, Jang Ji-Hun, Lee Hyun-Ju, Park Seong-Sik, Kim Sun-Ra, Lee Kyeong-Min, Kim Ji-Kyung, Park Ho, Jung Ho-Kyung

机构信息

National Development Institute of Korean Medicine, Jangheung-gun, South Korea.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 11;6(3):734-735. doi: 10.1080/23802359.2020.1860718.

Abstract

, distributed throughout Asia, is a traditional medicinal herb in Korea, with many potential beneficial effects including pain-relieving, anti-inflammatory, and anti-cancer activities. Despite its high pharmacological value, the genetic information on remains limited. In this study, the chloroplast genome of was sequenced using next-generation sequencing (NGS) technology and genome and phylogeny were analyzed using multiple tools. The chloroplast genome of was 152,731 bp in length with an inverted repeat region of 26,656 bp, including a large single-copy region of 84,389 bp and a small single copy region of 17,030 bp. The chloroplast genome included 113 genes comprising 80 protein-coding genes, 27 tRNA, and 5 rRNA genes. Phylogenetic analysis indicated that and share a close evolutionary relationship.

摘要

分布于亚洲各地,是韩国的一种传统药草,具有许多潜在的有益作用,包括止痛、抗炎和抗癌活性。尽管其具有很高的药理价值,但关于它的遗传信息仍然有限。在本研究中,使用下一代测序(NGS)技术对其叶绿体基因组进行了测序,并使用多种工具对基因组和系统发育进行了分析。其叶绿体基因组长度为152,731 bp,反向重复区域为26,656 bp,包括一个84,389 bp的大单拷贝区域和一个17,030 bp的小单拷贝区域。其叶绿体基因组包含113个基因,包括80个蛋白质编码基因、27个tRNA和5个rRNA基因。系统发育分析表明它与[某物种]具有密切的进化关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8a5/7954510/34883089b13a/TMDN_A_1860718_F0001_C.jpg

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