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剑虾(米尔斯)(甲壳纲,十足目,对虾科)线粒体全基因组测序

Sequencing of complete mitochondrial genome of sword prawn (Miers) (Crustacea, Decapoda, Penaeidae).

作者信息

Mao Zhi-Chao, Liu Ping, Duan Ya-Fei, Li Jian, Chen Ping, Meng Xian-Liang

机构信息

College of Fisheries and Life Science, Shanghai Ocean University, Shanghai, China.

Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, Qingdao, China.

出版信息

Mitochondrial DNA B Resour. 2016 Mar 29;1(1):259-260. doi: 10.1080/23802359.2016.1159927.

DOI:10.1080/23802359.2016.1159927
PMID:33644353
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7871835/
Abstract

The sword prawn (Miers) (Crustacea, Decapoda, Penaeidae) is an important commercial fishery species, distributed in the East China Sea. In this study, we described the complete mitochondrial genome of . The genome is 15,922 bp in length, encoding the standard set of 13 protein-coding genes, 22 tRNA genes and two rRNA genes, with circular organization. The overall A + T content is 67.20%; nucleotide frequency of the gene is as follows: A, 35.01%; C, 20.83%; G, 11.98%; T, 32.19%. The gene order of is the same as and and it mainly retains as the ground pattern. The complete mitogenome sequence information of would play an important part for further studies on molecular systematics and population genetics.

摘要

刀额新对虾(米尔恩斯)(甲壳纲,十足目,对虾科)是一种重要的商业渔业物种,分布于中国东海。在本研究中,我们描述了……的完整线粒体基因组。该基因组长度为15,922 bp,编码一套标准的13个蛋白质编码基因、22个tRNA基因和两个rRNA基因,呈环状组织。总体A + T含量为67.20%;基因的核苷酸频率如下:A,35.01%;C,20.83%;G,11.98%;T,32.19%。……的基因顺序与……和……相同,并且它主要保留为……的基本模式。……的完整线粒体基因组序列信息将对分子系统学和群体遗传学的进一步研究发挥重要作用。 (注:原文中有部分未明确表述的内容,用“……”代替)

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5988/7871835/37b96a59efb2/TMDN_A_1159927_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5988/7871835/37b96a59efb2/TMDN_A_1159927_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/5988/7871835/37b96a59efb2/TMDN_A_1159927_F0001_C.jpg

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Digging deeper: new gene order rearrangements and distinct patterns of codons usage in mitochondrial genomes among shrimps from the Axiidea, Gebiidea and Caridea (Crustacea: Decapoda).

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Automatic annotation of organellar genomes with DOGMA.使用DOGMA对细胞器基因组进行自动注释。
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