Novosibirsk State University, 630090 Novosibirsk, Russia.
Institute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences, 630090 Novosibirsk, Russia.
Int J Mol Sci. 2021 Feb 26;22(5):2346. doi: 10.3390/ijms22052346.
Earlier, after our bioinformatic analysis of single-nucleotide polymorphisms of TATA-binding protein-binding sites within gene promoters on the human Y chromosome, we suggested that human reproductive potential diminishes during self-domestication. Here, we implemented bioinformatics models of human diseases using animal in vivo genome-wide RNA-Seq data to compare the effect of co-directed changes in the expression of orthologous genes on human reproductive potential and during the divergence of domestic and wild animals from their nearest common ancestor (NCA). For example, serotonin receptor 3A () deficiency contributes to sudden death in pregnancy, consistently with underexpression in guinea pigs ( during their divergence from their NCA with cavy (). Overall, 25 and three differentially expressed genes (hereinafter, DEGs) in domestic animals versus 11 and 17 DEGs in wild animals show the direction consistent with human orthologous gene-markers of reduced and increased reproductive potential. This indicates a reliable association between DEGs in domestic animals and human orthologous genes reducing reproductive potential (Pearson's χ test < 0.001, Fisher's exact test < 0.05, binomial distribution < 0.0001), whereas DEGs in wild animals uniformly match human orthologous genes decreasing and increasing human reproductive potential ( > 0.1; binomial distribution), thus enforcing the norm (wild type).
早些时候,在我们对人类 Y 染色体基因启动子上 TATA 结合蛋白结合位点的单核苷酸多态性进行了生物信息学分析之后,我们提出人类的生殖能力在自我驯化过程中会逐渐下降。在这里,我们使用动物体内全基因组 RNA-Seq 数据实现了人类疾病的生物信息学模型,以比较直系同源基因表达的共同定向变化对人类生殖能力的影响,以及在动物从其最近的共同祖先(NCA)中家养和野生动物的分化过程中。例如,血清素受体 3A()缺乏会导致妊娠时突然死亡,这与豚鼠中的表达不足一致(在与豚鼠()分化过程中)。总体而言,25 个和 3 个在家养动物中差异表达的基因(以下简称 DEGs)与 11 个和 17 个在野生动物中差异表达的基因显示出与人类同源基因标记生殖能力降低和增加的方向一致。这表明家养动物中的 DEGs 与人类同源基因降低生殖能力之间存在可靠关联(Pearson χ 检验<0.001,Fisher 精确检验<0.05,二项分布<0.0001),而野生动物中的 DEGs 则与人类同源基因一致地降低和增加人类生殖能力(>0.1;二项分布),从而加强了规范(野生型)。
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