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基于随机网络的越南非洲猪瘟病毒在农场层面传播的模拟模型。

A stochastic network-based model to simulate farm-level transmission of African swine fever virus in Vietnam.

机构信息

International Livestock Research Institute (ILRI), Hanoi, Vietnam.

Department of Health Management, Atlantic Veterinary College, University of Prince Edward Island, Charlottetown, PE, Canada.

出版信息

PLoS One. 2021 Mar 3;16(3):e0247770. doi: 10.1371/journal.pone.0247770. eCollection 2021.

Abstract

African swine fever virus is highly contagious, and mortality rates reach up to 100% depending on the host, virus dose, and the transmission routes. The main objective of this study was to develop a network-based simulation model for the farm-level transmission of ASF virus to evaluate the impact of changes in farm connectivity on ASF spread in Vietnam. A hypothetical population of 1,000 pig farms was created and used for the network-based simulation, where each farm represented a node, and the connection between farms represented an edge. The three scenarios modelled in this way (baseline, low, and high) evaluated the impact of connectivity on disease transmission. The median number of infected farms was higher as the connectivity increased (low: 659, baseline: 968 and high: 993). In addition, we evaluated the impact of the culling strategy on the number of infected farms. A total of four scenarios were simulated depending on the timing of culling after a farm was infected. We found that the timing of culling at 16, 12, 8, and 6 weeks had resulted in a reduction of the number of median infected farms by 81.92%, 91.63%, 100%, and 100%, respectively. Finally, our evaluation of the implication of stability of ties between farms indicated that if the farms were to have the same trading partners for at least six months could significantly reduce the median number of infected farms to two (95th percentile: 413) than in the basic model. Our study showed that pig movements among farms had a significant influence on the transmission dynamics of ASF virus. In addition, we found that the either timing of culling, reduction in the number of trading partners each farm had, or decreased mean contact rate during the outbreaks were essential to prevent or stop further outbreaks.

摘要

非洲猪瘟病毒具有高度传染性,死亡率取决于宿主、病毒剂量和传播途径,可达 100%。本研究的主要目的是建立一个基于网络的非洲猪瘟病毒农场级传播模拟模型,以评估农场连接变化对越南非洲猪瘟传播的影响。通过创建一个假设的 1000 个养猪场的人口,使用基于网络的模拟,每个农场代表一个节点,农场之间的连接代表一个边。以这种方式模拟的三种情况(基线、低和高)评估了连接性对疾病传播的影响。随着连接性的增加,感染农场的中位数数量增加(低:659,基线:968,高:993)。此外,我们还评估了扑杀策略对感染农场数量的影响。根据农场感染后扑杀的时间,共模拟了四个方案。我们发现,在感染后 16、12、8 和 6 周进行扑杀的时间分别使中位数感染农场数量减少了 81.92%、91.63%、100%和 100%。最后,我们对农场之间关系稳定性的影响进行了评估,结果表明,如果农场至少有六个月的相同贸易伙伴,可将中位数感染农场数量显著减少到 2 个(95%分位数:413),比基本模型减少。本研究表明,农场之间的猪只移动对非洲猪瘟病毒的传播动态有重大影响。此外,我们发现扑杀时间、每个农场减少的贸易伙伴数量或疫情期间平均接触率的降低对于预防或阻止进一步的疫情爆发至关重要。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d58f/7928462/a38e89b843c5/pone.0247770.g001.jpg

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