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一种低成本、小规模、用于微生物的多重连续培养系统的构建与验证

Construction and Validation of A Low-cost, Small-scale, Multiplex Continuous Culturing System for Microorganisms.

作者信息

Tonoyan Lilit, Guihéneuf Freddy, Friel Ruari, O'Flaherty Vincent

机构信息

Westway Health, National University of Ireland Galway, Galway, Ireland.

Inalve, Nice, France.

出版信息

Bio Protoc. 2020 Nov 5;10(21):e3813. doi: 10.21769/BioProtoc.3813.

DOI:10.21769/BioProtoc.3813
PMID:33659466
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7842567/
Abstract

This protocol details the construction of a simple, low-cost, small-scale, multiplex chemostat system designed for the continuous cultivation of microorganisms in suspension (, bacteria, yeast, microalgae). The continuous culture device can operate at a working volume of 25 ml and allows the run of 8 chemostats in parallel by a single person. It provides a platform for parallel, long-term studies of evolution and adaptation of microorganisms under the stress of antimicrobial agents and/or toxic pollutants. The system complies with the varied needs of researchers for an accessible, highly-throughput and reliable tool that is nevertheless easy to construct, use and operate, and not demanding of space, materials, medium supply and workload. Here, we also validate the use of this system to generate resistance towards a novel antimicrobial and a commonly used antibiotic in an antimicrobial-sensitive model organism. We believe that this "Do It Yourself" (DIY) system may constitute a useful tool to address the global problem of antibiotic resistance and to develop non-antibiotic based therapies.

摘要

本方案详细介绍了一种简单、低成本、小规模的多重恒化器系统的构建,该系统专为悬浮状态下的微生物(如细菌、酵母、微藻)连续培养而设计。该连续培养装置工作体积为25毫升,单人即可并行操作8个恒化器。它为在抗菌剂和/或有毒污染物压力下微生物的进化和适应性进行平行、长期研究提供了一个平台。该系统满足了研究人员对一种易于构建、使用和操作,且对空间、材料、培养基供应和工作量要求不高的、可获取的、高通量且可靠的工具的各种需求。在此,我们还验证了该系统在对抗菌敏感的模式生物中产生对新型抗菌剂和常用抗生素抗性方面的用途。我们相信,这种“自己动手做”(DIY)系统可能成为解决全球抗生素耐药性问题和开发非抗生素疗法的有用工具。

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引用本文的文献

1
Mesostats-A multiplexed, low-cost, do-it-yourself continuous culturing system for experimental evolution of mesocosms.介观定态器 - 一种用于中观生态系统实验进化的多路复用、低成本、DIY 连续培养系统。
PLoS One. 2022 Jul 28;17(7):e0272052. doi: 10.1371/journal.pone.0272052. eCollection 2022.

本文引用的文献

1
Continuous culture of Escherichia coli, under selective pressure by a novel antimicrobial complex, does not result in development of resistance.新型抗菌复合物的选择压力下,大肠杆菌的连续培养不会导致耐药性的产生。
Sci Rep. 2019 Feb 20;9(1):2401. doi: 10.1038/s41598-019-38925-9.
2
Assembly of a Mini-Chemostat Array.微型恒化器阵列的组装。
Cold Spring Harb Protoc. 2017 Jul 5;2017(7):pdb.prot088997. doi: 10.1101/pdb.prot088997.
3
The enduring utility of continuous culturing in experimental evolution.连续培养在实验进化中的持久效用。
Genomics. 2014 Dec;104(6 Pt A):399-405. doi: 10.1016/j.ygeno.2014.09.015. Epub 2014 Oct 2.
4
The functional basis of adaptive evolution in chemostats.恒化器中适应性进化的功能基础。
FEMS Microbiol Rev. 2015 Jan;39(1):2-16. doi: 10.1111/1574-6976.12082. Epub 2014 Dec 4.
5
Experimental evolution as an efficient tool to dissect adaptive paths to antibiotic resistance.实验进化作为一种有效手段,可用于剖析抗生素耐药性的适应性进化途径。
Drug Resist Updat. 2013 Dec;16(6):96-107. doi: 10.1016/j.drup.2014.02.002. Epub 2014 Feb 10.