• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

基于噬菌体展示技术的 WDR5 肽配体的发现和鉴定。

Phage-Display Based Discovery and Characterization of Peptide Ligands against WDR5.

机构信息

Department of College of Pharmacy, University of Chinese Academy of Sciences, No. 19A Yuquan Road, Beijing 100049, China.

Department of Medicinal Chemistry, Shanghai Institute of Materia Medica, Chinese Academy of Sciences, 555 Zuchongzhi Road, Shanghai 201203, China.

出版信息

Molecules. 2021 Feb 25;26(5):1225. doi: 10.3390/molecules26051225.

DOI:10.3390/molecules26051225
PMID:33668971
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7956166/
Abstract

WD40 is a ubiquitous domain presented in at least 361 human proteins and acts as scaffold to form protein complexes. Among them, WDR5 protein is an important mediator in several protein complexes to exert its functions in histone modification and chromatin remodeling. Therefore, it was considered as a promising epigenetic target involving in anti-cancer drug development. In view of the protein-protein interaction nature of WDR5, we initialized a campaign to discover new peptide-mimic inhibitors of WDR5. In current study, we utilized the phage display technique and screened with a disulfide-based cyclic peptide phage library. Five rounds of biopanning were performed and isolated clones were sequenced. By analyzing the sequences, total five peptides were synthesized for binding assay. The four peptides are shown to have the moderate binding affinity. Finally, the detailed binding interactions were revealed by solving a WDR5-peptide cocrystal structure.

摘要

WD40 是一种普遍存在的结构域,存在于至少 361 个人类蛋白中,作为支架形成蛋白复合物。其中,WDR5 蛋白是几个蛋白复合物中的重要介质,在组蛋白修饰和染色质重塑中发挥作用。因此,它被认为是一种有前途的涉及抗癌药物开发的表观遗传靶点。鉴于 WDR5 的蛋白-蛋白相互作用性质,我们发起了一项发现 WDR5 新型肽模拟抑制剂的活动。在本研究中,我们利用噬菌体展示技术,用基于二硫键的环肽噬菌体文库进行筛选。进行了五轮生物淘选,分离出的克隆进行测序。通过分析序列,共合成了五个肽段进行结合实验。结果显示,四个肽段具有中等的结合亲和力。最后,通过解析 WDR5-肽共结晶结构揭示了详细的结合相互作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/b8aea70d5071/molecules-26-01225-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/ff784c313a2e/molecules-26-01225-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/8f9e8f796d36/molecules-26-01225-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/4014295bdf2d/molecules-26-01225-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/b8aea70d5071/molecules-26-01225-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/ff784c313a2e/molecules-26-01225-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/8f9e8f796d36/molecules-26-01225-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/4014295bdf2d/molecules-26-01225-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cd39/7956166/b8aea70d5071/molecules-26-01225-g004.jpg

相似文献

1
Phage-Display Based Discovery and Characterization of Peptide Ligands against WDR5.基于噬菌体展示技术的 WDR5 肽配体的发现和鉴定。
Molecules. 2021 Feb 25;26(5):1225. doi: 10.3390/molecules26051225.
2
Screening and optimization of phage display cyclic peptides against the WDR5 WBM site.针对WDR5的WBM位点筛选和优化噬菌体展示环肽
RSC Med Chem. 2023 Aug 17;14(10):2048-2057. doi: 10.1039/d3md00288h. eCollection 2023 Oct 18.
3
Phage display biopanning and isolation of target-unrelated peptides: in search of nonspecific binders hidden in a combinatorial library.噬菌体展示生物淘选及与靶标无关肽段的分离:探寻隐藏于组合文库中的非特异性结合物。
Amino Acids. 2016 Dec;48(12):2699-2716. doi: 10.1007/s00726-016-2329-6. Epub 2016 Sep 20.
4
Discovery of Potent Small-Molecule Inhibitors of WDR5-MYC Interaction.WDR5与MYC相互作用的强效小分子抑制剂的发现。
ACS Chem Biol. 2023 Jan 20;18(1):34-40. doi: 10.1021/acschembio.2c00843. Epub 2023 Jan 3.
5
Discovery and Structure-Based Optimization of Potent and Selective WD Repeat Domain 5 (WDR5) Inhibitors Containing a Dihydroisoquinolinone Bicyclic Core.发现并基于结构优化含有二氢异喹啉酮双环核心的强效和选择性 WD 重复结构域 5(WDR5)抑制剂。
J Med Chem. 2020 Jan 23;63(2):656-675. doi: 10.1021/acs.jmedchem.9b01608. Epub 2020 Jan 7.
6
Design and evaluation of a 6-mer amyloid-beta protein derived phage display library for molecular targeting of amyloid plaques in Alzheimer's disease: Comparison with two cyclic heptapeptides derived from a randomized phage display library.用于阿尔茨海默病淀粉样斑块分子靶向的 6 肽淀粉样β蛋白衍生噬菌体展示文库的设计与评价:与源自随机噬菌体展示文库的两个环状七肽的比较。
Peptides. 2011 Jun;32(6):1232-43. doi: 10.1016/j.peptides.2011.04.026. Epub 2011 May 6.
7
Multicyclic Peptides as Scaffolds for the Development of Tumor Targeting Agents.多环肽作为肿瘤靶向药物开发的支架
Curr Med Chem. 2017;24(20):2141-2155. doi: 10.2174/0929867324666170316120304.
8
hDM2 protein-binding peptides screened from stapled α-helical peptide phage display libraries with different types of staple linkers.从带有不同类型连接链的订书钉α-螺旋肽噬菌体展示文库中筛选出 hDM2 蛋白结合肽。
Bioorg Med Chem Lett. 2020 Dec 1;30(23):127605. doi: 10.1016/j.bmcl.2020.127605. Epub 2020 Oct 7.
9
Screening and Identification of Peptides Specifically Targeted to Gastric Cancer Cells from a Phage Display Peptide Library.从噬菌体展示肽库中筛选和鉴定特异性靶向胃癌细胞的肽段
Asian Pac J Cancer Prev. 2018 Apr 25;19(4):927-932. doi: 10.22034/APJCP.2018.19.4.927.
10
Identification and Characterization of Strychnine-Binding Peptides Using Phage-Display Screening.利用噬菌体展示筛选鉴定和表征士的宁结合肽
Protein Pept Lett. 2017;24(7):626-632. doi: 10.2174/0929866524666170404164408.

引用本文的文献

1
WD Repeat Domain 5 Inhibitors for Cancer Therapy: Not What You Think.用于癌症治疗的WD重复结构域5抑制剂:并非你所想的那样。
J Clin Med. 2024 Jan 3;13(1):274. doi: 10.3390/jcm13010274.
2
Screening and optimization of phage display cyclic peptides against the WDR5 WBM site.针对WDR5的WBM位点筛选和优化噬菌体展示环肽
RSC Med Chem. 2023 Aug 17;14(10):2048-2057. doi: 10.1039/d3md00288h. eCollection 2023 Oct 18.
3
Next-Generation Phage Display to Identify Peptide Ligands of Deubiquitinases.用于鉴定去泛素化酶肽配体的新一代噬菌体展示技术。

本文引用的文献

1
Rational Design and Evaluation of 6-(Pyrimidin-2-ylamino)-3,4-dihydroquinoxalin-2(1)-ones as Polypharmacological Inhibitors of BET and Kinases.6-(嘧啶-2-基氨基)-3,4-二氢喹喔啉-2(1H)-酮类作为 BET 和激酶的多药效抑制剂的合理设计与评价。
J Med Chem. 2020 Sep 10;63(17):9787-9802. doi: 10.1021/acs.jmedchem.0c00962. Epub 2020 Aug 26.
2
Discovery and Structure-Based Optimization of Potent and Selective WD Repeat Domain 5 (WDR5) Inhibitors Containing a Dihydroisoquinolinone Bicyclic Core.发现并基于结构优化含有二氢异喹啉酮双环核心的强效和选择性 WD 重复结构域 5(WDR5)抑制剂。
J Med Chem. 2020 Jan 23;63(2):656-675. doi: 10.1021/acs.jmedchem.9b01608. Epub 2020 Jan 7.
3
Methods Mol Biol. 2023;2591:189-218. doi: 10.1007/978-1-0716-2803-4_12.
Discovery and Optimization of Salicylic Acid-Derived Sulfonamide Inhibitors of the WD Repeat-Containing Protein 5-MYC Protein-Protein Interaction.
WD 重复蛋白 5-MYC 蛋白-蛋白相互作用的水杨酸衍生磺酰胺抑制剂的发现和优化。
J Med Chem. 2019 Dec 26;62(24):11232-11259. doi: 10.1021/acs.jmedchem.9b01411. Epub 2019 Dec 5.
4
A specific affinity cyclic peptide enhances the adhesion, expansion and proliferation of rat bone mesenchymal stem cells on β‑tricalcium phosphate scaffolds.特定亲和性环肽增强大鼠骨髓间充质干细胞在 β-磷酸三钙支架上的黏附、扩增和增殖。
Mol Med Rep. 2019 Aug;20(2):1157-1166. doi: 10.3892/mmr.2019.10335. Epub 2019 Jun 4.
5
WD40 Repeat Proteins: Signalling Scaffold with Diverse Functions.WD40 重复蛋白:具有多种功能的信号支架。
Protein J. 2018 Oct;37(5):391-406. doi: 10.1007/s10930-018-9785-7.
6
Discovery of Potent 2-Aryl-6,7-dihydro-5 H-pyrrolo[1,2- a]imidazoles as WDR5-WIN-Site Inhibitors Using Fragment-Based Methods and Structure-Based Design.基于片段的方法和基于结构的设计发现强效 2-芳基-6,7-二氢-5H-吡咯并[1,2-a]咪唑作为 WDR5-WIN 结构域抑制剂。
J Med Chem. 2018 Jul 12;61(13):5623-5642. doi: 10.1021/acs.jmedchem.8b00375. Epub 2018 Jun 29.
7
Moonlighting with WDR5: A Cellular Multitasker.与WDR5兼职:一个细胞多面手。
J Clin Med. 2018 Jan 30;7(2):21. doi: 10.3390/jcm7020021.
8
WD40 repeat domain proteins: a novel target class?WD40重复结构域蛋白:一种新型的靶标类别?
Nat Rev Drug Discov. 2017 Nov;16(11):773-786. doi: 10.1038/nrd.2017.179. Epub 2017 Oct 13.
9
Disease Association and Druggability of WD40 Repeat Proteins.WD40 重复蛋白的疾病关联和可成药性。
J Proteome Res. 2017 Oct 6;16(10):3766-3773. doi: 10.1021/acs.jproteome.7b00451. Epub 2017 Sep 28.
10
An Embryonic Stem Cell-Specific NuRD Complex Functions through Interaction with WDR5.胚胎干细胞特异性 NuRD 复合物通过与 WDR5 相互作用发挥功能。
Stem Cell Reports. 2017 Jun 6;8(6):1488-1496. doi: 10.1016/j.stemcr.2017.04.020. Epub 2017 May 18.