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生物信息学分析:FCGBP 在卵巢癌中的过表达及其临床意义。

A bioinformatic analysis: the overexpression and clinical significance of FCGBP in ovarian cancer.

机构信息

Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Linhai 317000, Zhejiang Province, People's Republic of China.

Department of Obstetrics and Gynecology, Taizhou Hospital of Zhejiang Province Affiliated to Wenzhou Medical University, Linhai 317000, Zhejiang Province, People's Republic of China.

出版信息

Aging (Albany NY). 2021 Mar 3;13(5):7416-7429. doi: 10.18632/aging.202601.

Abstract

Fc fragment of IgG-binding protein (FCGBP) is differentially expressed in various tumors. However, the correlation between FCGBP and immune cell infiltration in ovarian cancer remains unclear. FCGBP expression was analyzed using The Cancer Genome Atlas (TCGA) pan-cancer data, and the ovarian cancer expression profile was analyzed using the Gene Expression Omnibus database. The clinical prognostic value of FCGBP was evaluated using clinical survival data from TCGA. Enrichment analysis of FCGBP was performed using the R package clusterProfiler. Based on known immune cell infiltration scores for samples found in TCGA, we analyzed the association between immune cell infiltration level and FCGBP expression. FCGBP was highly expressed and associated with poorer overall survival (p = 0.00051) and disease-specific survival (p = 0.0012) in ovarian cancer and other tumors. Additionally, high FCGBP expression correlated significantly with immune-related gene sets, including those involved in chemokine signaling pathways and innate and adaptive immunity. Further analysis showed that M2 macrophage infiltration increased and M1 macrophage infiltration decreased in tissues with high FCGBP expression. Our study suggests that FCGBP contributes to M2 macrophage polarization by acting as an oncogene in ovarian cancer. FCGBP may represent a clinically helpful biomarker for predicting overall survival of ovarian cancer patients.

摘要

IgG 结合蛋白(FCGBP)的 Fc 片段在各种肿瘤中表达差异。然而,FCGBP 与卵巢癌中免疫细胞浸润的相关性尚不清楚。使用癌症基因组图谱(TCGA)泛癌数据分析 FCGBP 的表达,并使用基因表达综合数据库分析卵巢癌的表达谱。使用 TCGA 的临床生存数据评估 FCGBP 的临床预后价值。使用 R 包 clusterProfiler 进行 FCGBP 的富集分析。基于 TCGA 中发现的样本的已知免疫细胞浸润评分,我们分析了免疫细胞浸润水平与 FCGBP 表达之间的关联。FCGBP 在卵巢癌和其他肿瘤中高表达,并与总体生存(p = 0.00051)和疾病特异性生存(p = 0.0012)较差相关。此外,高 FCGBP 表达与免疫相关基因集显著相关,包括趋化因子信号通路和固有及适应性免疫相关基因集。进一步分析表明,在 FCGBP 高表达的组织中,M2 巨噬细胞浸润增加,M1 巨噬细胞浸润减少。我们的研究表明,FCGBP 通过作为卵巢癌中的癌基因促进 M2 巨噬细胞极化。FCGBP 可能代表预测卵巢癌患者总生存率的一种有临床帮助的生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c576/7993703/61c625401838/aging-13-202601-g001.jpg

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