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采用 iTRAQ 蛋白质组学分析筛选桑黄中与几丁质合成及其衍生物相关的蛋白质。

Screening for proteins related to the biosynthesis of hispidin and its derivatives in Phellinus igniarius using iTRAQ proteomic analysis.

机构信息

College of Pharmacy, Ningxia Medical University, Yinchuan, 750004, P.R. China.

Department of Pharmaceutics, General Hospital of Ningxia Medical University, Yinchuan, 750004, P.R. China.

出版信息

BMC Microbiol. 2021 Mar 12;21(1):81. doi: 10.1186/s12866-021-02134-0.

Abstract

BACKGROUND

Hispidin (HIP) and its derivatives, a class of natural fungal metabolites, possess complex chemical structures with extensive pharmacological activities. Phellinus igniarius, the most common source of HIP, can be used as both medicine and food. However, the biosynthetic pathway of HIP in P. igniarius remains unclear and we have a limited understanding of the regulatory mechanisms related to HIP. In this work, we sought to illustrate a biosynthesis system for hispidin and its derivatives at the protein level.

RESULTS

We found that tricetolatone (TL) is a key biosynthetic precursor in the biosynthetic pathway of hispidin and that its addition led to increased production of hispidin and various hispidin derivatives. Based on the changes in the concentrations of precursors and intermediates, key timepoints in the biosynthetic process were identified. We used isobaric tags for relative and absolute quantification (iTRAQ) to study dynamic changes of related proteins in vitro. The 270 differentially expressed proteins were determined by GO enrichment analysis to be primarily related to energy metabolism, oxidative phosphorylation, and environmental stress responses after TL supplementation. The differentially expressed proteins were related to ATP synthase, NAD binding protein, oxidoreductase, and other elements associated with electron transfer and dehydrogenation reactions during the biosynthesis of hispidin and its derivatives. Multiple reaction monitoring (MRM) technology was used to selectively verify the iTRAQ results, leading us to screen 11 proteins that were predicted to be related to the biosynthesis pathways.

CONCLUTION

These findings help to clarify the molecular mechanism of biosynthesis of hispidin and its derivatives and may serve as a foundation for future strategies to identify new hispidin derivatives.

摘要

背景

棘菌素(HIP)及其衍生物是一类天然真菌代谢产物,具有复杂的化学结构和广泛的药理活性。作为 HIP 最常见来源的火木层孔菌既可以作为药物,也可以作为食品。然而,火木层孔菌中 HIP 的生物合成途径仍不清楚,我们对与 HIP 相关的调控机制的了解也很有限。在这项工作中,我们试图在蛋白质水平上阐明棘菌素及其衍生物的生物合成系统。

结果

我们发现三乙酰戈米辛 K(TL)是棘菌素生物合成途径中的关键生物合成前体,添加 TL 可导致棘菌素及其各种衍生物的产量增加。基于前体和中间产物浓度的变化,确定了生物合成过程中的关键时间点。我们使用相对和绝对定量同位素标记(iTRAQ)技术研究了体外相关蛋白的动态变化。通过 GO 富集分析,确定了 270 个差异表达蛋白,这些蛋白主要与 TL 补充后的能量代谢、氧化磷酸化和环境应激反应有关。差异表达蛋白与 ATP 合酶、NAD 结合蛋白、氧化还原酶等与棘菌素及其衍生物生物合成过程中的电子传递和脱氢反应相关的元素有关。采用多重反应监测(MRM)技术对 iTRAQ 结果进行选择性验证,筛选出 11 个预测与生物合成途径相关的蛋白。

结论

这些发现有助于阐明棘菌素及其衍生物生物合成的分子机制,并为未来识别新的棘菌素衍生物的策略提供基础。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d0f9/7953727/95acaf5eedbd/12866_2021_2134_Fig1_HTML.jpg

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