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从人类腹腔脓肿中分离出的洋葱伯克霍尔德菌复合体菌株的基因组序列草图

Draft Genome Sequence of a Burkholderia cepacia Complex Strain Isolated from a Human Intra-abdominal Abscess.

作者信息

Zhai Yuting, DeSear Kathryn E, Cherabuddi Kartik, Morris J Glenn, Jeong Kwangcheol C

机构信息

Emerging Pathogens Institute, University of Florida, Gainesville, Florida, USA.

Department of Animal Sciences, Institute of Food and Agricultural Sciences, University of Florida, Gainesville, Florida, USA.

出版信息

Microbiol Resour Announc. 2021 Mar 18;10(11):e00091-21. doi: 10.1128/MRA.00091-21.

DOI:10.1128/MRA.00091-21
PMID:33737360
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7975878/
Abstract

complex (Bcc) bacteria are opportunistic pathogens with high transmissibility and mortality. Here, we report the draft genome sequence of a Bcc strain isolated from a deep abscess culture in an immunocompetent patient with no relevant prior medical history.

摘要

复杂(嗜麦芽窄食单胞菌)细菌是具有高传播性和致死率的机会致病菌。在此,我们报告了从一名无相关既往病史的免疫功能正常患者的深部脓肿培养物中分离出的一株嗜麦芽窄食单胞菌菌株的基因组草图序列。

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QUAST: quality assessment tool for genome assemblies.QUAST:基因组组装质量评估工具。
Bioinformatics. 2013 Apr 15;29(8):1072-5. doi: 10.1093/bioinformatics/btt086. Epub 2013 Feb 19.
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SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.
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