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对嗜冷红杆菌进行零下温度的盐水培养揭示了其在极端冰冷环境中维持生命的策略和生物标志物。

Subzero, saline incubations of Colwellia psychrerythraea reveal strategies and biomarkers for sustained life in extreme icy environments.

作者信息

Mudge Miranda C, Nunn Brook L, Firth Erin, Ewert Marcela, Hales Kianna, Fondrie William E, Noble William S, Toner Jonathan, Light Bonnie, Junge Karen A

机构信息

Department of Genome Sciences, University of Washington, Seattle, WA, USA.

Department of Molecular and Cellular Biology, University of Washington, Seattle, WA, USA.

出版信息

Environ Microbiol. 2021 Jul;23(7):3840-3866. doi: 10.1111/1462-2920.15485. Epub 2021 Apr 12.

Abstract

Colwellia psychrerythraea is a marine psychrophilic bacterium known for its remarkable ability to maintain activity during long-term exposure to extreme subzero temperatures and correspondingly high salinities in sea ice. These microorganisms must have adaptations to both high salinity and low temperature to survive, be metabolically active, or grow in the ice. Here, we report on an experimental design that allowed us to monitor culturability, cell abundance, activity and proteomic signatures of C. psychrerythraea strain 34H (Cp34H) in subzero brines and supercooled sea water through long-term incubations under eight conditions with varying subzero temperatures, salinities and nutrient additions. Shotgun proteomics found novel metabolic strategies used to maintain culturability in response to each independent experimental variable, particularly in pathways regulating carbon, nitrogen and fatty acid metabolism. Statistical analysis of abundances of proteins uniquely identified in isolated conditions provide metabolism-specific protein biosignatures indicative of growth or survival in either increased salinity, decreased temperature, or nutrient limitation. Additionally, to aid in the search for extant life on other icy worlds, analysis of detected short peptides in -10°C incubations after 4 months identified over 500 potential biosignatures that could indicate the presence of terrestrial-like cold-active or halophilic metabolisms on other icy worlds.

摘要

嗜冷红杆菌是一种海洋嗜冷细菌,以其在长期暴露于极端零下温度和海冰中相应高盐度环境下仍能保持活性的非凡能力而闻名。这些微生物必须适应高盐度和低温才能在冰中生存、保持代谢活性或生长。在此,我们报告了一项实验设计,该设计使我们能够通过在八种不同的零下温度、盐度和营养添加条件下进行长期培养,监测嗜冷红杆菌34H菌株(Cp34H)在零下盐水和过冷海水中的可培养性、细胞丰度、活性和蛋白质组特征。鸟枪法蛋白质组学发现了用于响应每个独立实验变量以维持可培养性的新代谢策略,特别是在调节碳、氮和脂肪酸代谢的途径中。对在分离条件下唯一鉴定出的蛋白质丰度进行统计分析,提供了特定于代谢的蛋白质生物标志物,表明在盐度增加、温度降低或营养限制的情况下的生长或存活情况。此外,为了帮助在其他冰冻星球上寻找现存生命,对4个月后在-10°C培养物中检测到的短肽进行分析,鉴定出500多种潜在的生物标志物,这些生物标志物可能表明在其他冰冻星球上存在类似地球的冷活性或嗜盐代谢。

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