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甜橙(L.)斯威特叶绿体基因组的完整分子序列

The complete molecular sequence of chloroplast genome of (L.) Sweet.

作者信息

Li Na, Bai Ji-Qing, Gao Su, Yang Lei, Li Jing, Du Shao-Bing, Wang Xiao-Ping

机构信息

College of Pharmacy, Shaanxi University of Chinese Medicine, Xianyang, PR China.

Shaanxi Quality Monitoring and Technology Service Center for Chinese Materia Medica Raw Materials, Xianyang, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 11;6(3):758-759. doi: 10.1080/23802359.2021.1878958.

Abstract

The complete molecular sequence of chloroplast genome of (L.) Sweet was firstly assembled and characterized using Illumina sequencing technology. It is 151916 bp in length, with a GC content of 35.4%, and has a typical quadrant structure, including a large single-copy region (LSC), a pair of inverted repeat regions (IRs) and a small single-copy region (SSC), the sequence length is 81132, 53244, 17540 bp, respectively. There are 131 genes in the chloroplast genome, including 84 encoding protein genes, 8 genes, and 38 genes. Phylogenetic analysis showed that clustered into a large evolutionary clade with three species.

摘要

首次利用Illumina测序技术组装并鉴定了(L.)Sweet叶绿体基因组的完整分子序列。其长度为151916 bp,GC含量为35.4%,具有典型的四分体结构,包括一个大单拷贝区域(LSC)、一对反向重复区域(IRs)和一个小单拷贝区域(SSC),序列长度分别为81132、53244、17540 bp。该叶绿体基因组中有131个基因,包括84个编码蛋白质的基因、8个基因和38个基因。系统发育分析表明,与三个物种聚集在一个大的进化分支中。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6254/7954507/c09a5ca9bc6b/TMDN_A_1878958_F0001_B.jpg

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