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三环芳香型 II 聚酮类化合物瑞希利德的生物合成:三步环化后新的潜在三环氧合作用。

Biosynthesis of the Tricyclic Aromatic Type II Polyketide Rishirilide: New Potential Third Ring Oxygenation after Three Cyclization Steps.

机构信息

Institute of Pharmaceutical Biology and Biotechnology, Albert-Ludwigs-Universität, Stefan-Meier-Straße 19, 79104, Freiburg, Germany.

Institute of Biochemistry, Albert-Ludwigs-Universität, Albertstr 21, 79104, Freiburg, Germany.

出版信息

Mol Biotechnol. 2021 Jun;63(6):502-514. doi: 10.1007/s12033-021-00314-x. Epub 2021 Mar 24.

Abstract

Rishirilides are a group of PKS II secondary metabolites produced by Streptomyces bottropensis Gö C4/4. Biosynthetic studies in the past have elucidated early and late steps of rishirilide biosynthesis. This work is aiming to solve the remaining steps in the rishirilide biosynthesis. Inactivation of the cyclase gene rslC3 in Streptomyces bottropensis resulted in an interruption of rishirilide production. Instead, accumulation of the tricyclic aromatic galvaquinones was observed. Similar results were observed after deletion of rslO4. Closer inspection into RslO4 crystal structure in addition to site-directed mutagenesis and molecular dynamic simulations revealed that RslO4 might be responsible for quinone formation on the third ring. The RslO1 three-dimensional structure shows a high similarity to FMN-dependent luciferase-like monooxygenases such as the epoxy-forming MsnO8 which acts with the flavin reductase MsnO3 in mensacarcin biosynthesis in the same strain. The high sequence similarity between RslO2 and MsnO3 suggests that RslO2 provides RslO1 with reduced FMN to form an epoxide that serves as substrate for RslO5.

摘要

里希利利德斯是一组由博特罗彭塞链霉菌 Gö C4/4 产生的 PKS II 次级代谢产物。过去的生物合成研究阐明了里希利利德斯生物合成的早期和晚期步骤。这项工作旨在解决里希利利德斯生物合成中剩下的步骤。博特罗彭塞链霉菌中环化酶基因 rslC3 的失活导致里希利利德斯的产生中断。相反,观察到三环芳香族 galvaquinones 的积累。在删除 rslO4 后也观察到类似的结果。对 RslO4 晶体结构的仔细检查,以及定点突变和分子动力学模拟,表明 RslO4 可能负责第三环上的醌形成。RslO1 的三维结构与黄素依赖型荧光素酶样单加氧酶(如形成环氧化物的 MsnO8)高度相似,后者在同一菌株的 mensacarcin 生物合成中与黄素还原酶 MsnO3 一起作用。RslO2 和 MsnO3 之间的高序列相似性表明,RslO2 为 RslO1 提供还原型 FMN 以形成环氧化物,作为 RslO5 的底物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9338/8093152/b6c59ecbe81b/12033_2021_314_Fig1_HTML.jpg

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本文引用的文献

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Early Steps in the Biosynthetic Pathway of Rishirilide B.
Molecules. 2020 Apr 23;25(8):1955. doi: 10.3390/molecules25081955.
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Oxidative Carbon Backbone Rearrangement in Rishirilide Biosynthesis.
J Am Chem Soc. 2020 Apr 1;142(13):5913-5917. doi: 10.1021/jacs.9b12736. Epub 2020 Mar 19.
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