从黄胸散白蚁后肠分离出的菌株GY75和GY617的基因组序列草图
Draft Genome Sequences of sp. Strains GY75 and GY617, Isolated from the Hindgut of Reticulitermes flavipes.
作者信息
Bridges Charles M, Gage Daniel J
机构信息
Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA.
Department of Molecular and Cell Biology, University of Connecticut, Storrs, Connecticut, USA
出版信息
Microbiol Resour Announc. 2021 Mar 25;10(12):e00079-21. doi: 10.1128/MRA.00079-21.
Abstract
species are facultative heterotrophs capable of growth on lignocellulose-derived polysaccharides. species harbor myriad genes involved in glycan modification and are well suited to the lignocellulose-rich conditions within the termite hindgut. Here, we report draft genome sequences for sp. strains GY75 and GY617, isolated from the hindgut of .
摘要
这些物种是兼性异养生物，能够在木质纤维素衍生的多糖上生长。这些物种拥有众多参与聚糖修饰的基因，非常适合白蚁后肠内富含木质纤维素的环境。在这里，我们报告了从 的后肠中分离出的 sp. 菌株GY75和GY617的基因组草图序列。
相似文献
1
Draft Genome Sequences of sp. Strains GY75 and GY617, Isolated from the Hindgut of Reticulitermes flavipes.从黄胸散白蚁后肠分离出的菌株GY75和GY617的基因组序列草图
Microbiol Resour Announc. 2021 Mar 25;10(12):e00079-21. doi: 10.1128/MRA.00079-21.
2
Draft Genome Sequences of sp. Strains BGC7 and HGC4, Isolated from the Hindgut of a Lower Termite.从低等白蚁后肠分离出的菌株BGC7和HGC4的基因组序列草图
Microbiol Resour Announc. 2021 Jan 28;10(4):e01427-20. doi: 10.1128/MRA.01427-20.
3
Draft Genome Sequences of Strains TAV3 and TAV4 (: ), Isolated from a Wood-Feeding Termite, and Analysis of Their Polysaccharide-Degrading Enzymes.从取食木材的白蚁中分离出的TAV3和TAV4菌株（: ）的基因组序列草图及其多糖降解酶分析
Microbiol Resour Announc. 2020 Jan 9;9(2):e01192-19. doi: 10.1128/MRA.01192-19.
4
Characterization of the Core and Caste-Specific Microbiota in the Termite, Reticulitermes flavipes.黄胸散白蚁中核心菌群和特定品级菌群的特征分析
Front Microbiol. 2016 Feb 17;7:171. doi: 10.3389/fmicb.2016.00171. eCollection 2016.
5
Impact of oxygen on metabolic fluxes and in situ rates of reductive acetogenesis in the hindgut of the wood-feeding termite Reticulitermes flavipes.氧气对食木白蚁黄胸散白蚁后肠中代谢通量及原位还原产乙酸速率的影响
Environ Microbiol. 2000 Aug;2(4):436-49. doi: 10.1046/j.1462-2920.2000.00127.x.
6
Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes.木食性白蚁黄胸散白蚁潜在兼性甲基营养菌奥皮图菌科细菌菌株TAV5的全基因组序列
Genome Announc. 2015 Mar 5;3(2):e00060-15. doi: 10.1128/genomeA.00060-15.
7
Draft Genome Sequence of Dysgonomonas macrotermitis Strain JCM 19375T, Isolated from the Gut of a Termite.从白蚁肠道分离的巨白蚁栖菌（Dysgonomonas macrotermitis）菌株JCM 19375T的基因组序列草图
Genome Announc. 2015 Aug 27;3(4):e00963-15. doi: 10.1128/genomeA.00963-15.
8
The hindgut lumen prokaryotic microbiota of the termite Reticulitermes flavipes and its responses to dietary lignocellulose composition.木白蚁（Reticulitermes flavipes）后肠腔原核微生物群及其对膳食木质纤维素组成的响应。
Mol Ecol. 2013 Apr;22(7):1836-53. doi: 10.1111/mec.12230. Epub 2013 Feb 4.
9
Hydrogen Concentration Profiles at the Oxic-Anoxic Interface: a Microsensor Study of the Hindgut of the Wood-Feeding Lower Termite Reticulitermes flavipes (Kollar).好氧-缺氧界面处的氢浓度分布：木质素取食的低等白蚁红火蚁后肠的微传感器研究。
Appl Environ Microbiol. 1997 Oct;63(10):4039-46. doi: 10.1128/aem.63.10.4039-4046.1997.
10
Dysgonomonas termitidis sp. nov., isolated from the gut of the subterranean termite Reticulitermes speratus.新种白蚁栖 Dysgonomonas菌，从地下白蚁黄胸散白蚁的肠道中分离得到。
Int J Syst Evol Microbiol. 2015 Feb;65(Pt 2):681-685. doi: 10.1099/ijs.0.070391-0. Epub 2014 Nov 26.
引用本文的文献
1
Diversity and functional analysis of gut microbiota reveal ecological adaptations in the inquilinism of and its host .肠道微生物群的多样性和功能分析揭示了 与其宿主共栖关系中的生态适应性。 （注：原文中“the inquilinism of and its host ”中间缺少具体内容）
Front Microbiol. 2025 Jun 25;16:1587281. doi: 10.3389/fmicb.2025.1587281. eCollection 2025.
本文引用的文献
1
Draft Genome Sequences of sp. Strains BGC7 and HGC4, Isolated from the Hindgut of a Lower Termite.从低等白蚁后肠分离出的菌株BGC7和HGC4的基因组序列草图
Microbiol Resour Announc. 2021 Jan 28;10(4):e01427-20. doi: 10.1128/MRA.01427-20.
2
Development and application of aerobic, chemically defined media for Dysgonomonas.用于 Dysgonomonas 的好氧、化学成分确定的培养基的开发和应用。
Anaerobe. 2021 Feb;67:102302. doi: 10.1016/j.anaerobe.2020.102302. Epub 2020 Dec 1.
3
MAC: Merging Assemblies by Using Adjacency Algebraic Model and Classification.MAC：基于邻接代数模型和分类的装配合并
Front Genet. 2020 Jan 31;10:1396. doi: 10.3389/fgene.2019.01396. eCollection 2019.
4
TYGS is an automated high-throughput platform for state-of-the-art genome-based taxonomy.TYGS 是一个自动化的高通量平台，用于最先进的基于基因组的分类学。
Nat Commun. 2019 May 16;10(1):2182. doi: 10.1038/s41467-019-10210-3.
5
KBase: The United States Department of Energy Systems Biology Knowledgebase.KBase：美国能源部系统生物学知识库。
Nat Biotechnol. 2018 Jul 6;36(7):566-569. doi: 10.1038/nbt.4163.
6
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation.dbCAN2：一个用于自动化碳水化合物活性酶注释的元服务器。
Nucleic Acids Res. 2018 Jul 2;46(W1):W95-W101. doi: 10.1093/nar/gky418.
7
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
8
CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes.CheckM：评估从分离株、单细胞和宏基因组中获得的微生物基因组质量。
Genome Res. 2015 Jul;25(7):1043-55. doi: 10.1101/gr.186072.114. Epub 2015 May 14.
9
Pilon: an integrated tool for comprehensive microbial variant detection and genome assembly improvement.Pilon：一种用于全面微生物变异检测和基因组组装改进的集成工具。
PLoS One. 2014 Nov 19;9(11):e112963. doi: 10.1371/journal.pone.0112963. eCollection 2014.
10
A5-miseq: an updated pipeline to assemble microbial genomes from Illumina MiSeq data.A5-miseq：一种用于从Illumina MiSeq数据组装微生物基因组的更新流程。
Bioinformatics. 2015 Feb 15;31(4):587-9. doi: 10.1093/bioinformatics/btu661. Epub 2014 Oct 22.
Zotero 插件