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一个来自中新世的故事:基于分子钟的L.(十字花科,大蒜芥族)系统发育研究

A story from the Miocene: Clock-dated phylogeny of L. (Sisymbrieae, Brassicaceae).

作者信息

Žerdoner Čalasan Anže, German Dmitry A, Hurka Herbert, Neuffer Barbara

机构信息

Department 5: Biology/Chemistry, Botany University of Osnabrueck Osnabrueck Germany.

South-Siberian Botanical Garden Altai State University Barnaul Russia.

出版信息

Ecol Evol. 2021 Mar 2;11(6):2573-2595. doi: 10.1002/ece3.7217. eCollection 2021 Mar.

DOI:10.1002/ece3.7217
PMID:33767822
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7981217/
Abstract

Morphological variability and imprecise generic boundaries have hindered systematic, taxonomical, and nomenclatural studies of L. (Brassicaceae, Sisymbrieae DC.). The members of this almost exclusively Old-World genus grow mostly on highly porous substrates across open steppe, semidesert, or ruderal habitats in the temperate zone of the Northern Hemisphere and African subtropics. The present study placed the biological history of L. into time and space and rendered the tribus Sisymbrieae as monotypic. Five nuclear-encoded and three chloroplast-encoded loci of approximately 85% of all currently accepted species were investigated. Several accessions per species covering their whole distribution range allowed for a more representative assessment of intraspecific genetic diversity. In the light of fossil absence, the impact of different secondary calibration methods and taxon sets on time spans was tested, and we showed that such a combinatorial nested dating approach is beneficial. Multigene phylogeny accompanied with a time divergence estimation analysis placed the onset and development of this tribus into the western Irano-Turanian floristic region during the Miocene. Continuous increase in continentality and decrease in temperatures promoted the diversity of the Sisymbrieae, which invaded the open grasslands habitats in Eurasia, Mediterranean, and South Africa throughout the Pliocene and Pleistocene. Our results support the assumption of the Irano-Turanian region as a biodiversity reservoir for adjacent regions.

摘要

形态变异和不精确的属级界限阻碍了对L.(十字花科,大蒜芥族DC.)的系统、分类和命名研究。这个几乎完全分布于旧世界的属的成员大多生长在北半球温带和非洲亚热带开阔草原、半荒漠或杂草丛生栖息地的高孔隙度基质上。本研究将L.的生物历史置于时间和空间中,并使大蒜芥族成为单型族。对所有目前已接受物种中约85%的五个核编码和三个叶绿体编码基因座进行了研究。每个物种选取多个覆盖其整个分布范围的样本,以便对种内遗传多样性进行更具代表性的评估。鉴于缺乏化石,测试了不同的二级校准方法和分类群集对时间跨度的影响,并且我们表明这种组合嵌套定年方法是有益的。多基因系统发育分析以及时间分歧估计分析将该族的起源和发展置于中新世的伊朗 - 图兰西部植物区。大陆性的持续增加和温度的降低促进了大蒜芥族的多样性,该族在整个上新世和更新世侵入了欧亚大陆、地中海和南非的开阔草原栖息地。我们的结果支持将伊朗 - 图兰地区假设为相邻地区生物多样性储备库的观点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/448cb6d68cd6/ECE3-11-2573-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/f07a0e4f5ba5/ECE3-11-2573-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/fd494c2e921c/ECE3-11-2573-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/5cb5cd528683/ECE3-11-2573-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/f38d1ab16931/ECE3-11-2573-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/448cb6d68cd6/ECE3-11-2573-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/f07a0e4f5ba5/ECE3-11-2573-g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/fd494c2e921c/ECE3-11-2573-g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/5cb5cd528683/ECE3-11-2573-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/f38d1ab16931/ECE3-11-2573-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/257b/7981217/448cb6d68cd6/ECE3-11-2573-g001.jpg

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