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分析 SNARE Stx8 的回收利用表明,再循环分选基序已经发生了进化分歧。

Analysis of the SNARE Stx8 recycling reveals that the retromer-sorting motif has undergone evolutionary divergence.

机构信息

Departamento de Microbiología y Genética, Universidad de Salamanca. Salamanca. Spain.

Instituto de Biología Funcional y Genómica (IBFG), Consejo Superior de Investigaciones Científicas (CSIC). Salamanca. Spain.

出版信息

PLoS Genet. 2021 Mar 31;17(3):e1009463. doi: 10.1371/journal.pgen.1009463. eCollection 2021 Mar.

Abstract

Fsv1/Stx8 is a Schizosaccharomyces pombe protein similar to mammalian syntaxin 8. stx8Δ cells are sensitive to salts, and the prevacuolar endosome (PVE) is altered in stx8Δ cells. These defects depend on the SNARE domain, data that confirm the conserved function of syntaxin8 and Stx8 in vesicle fusion at the PVE. Stx8 localizes at the trans-Golgi network (TGN) and the prevacuolar endosome (PVE), and its recycling depends on the retromer component Vps35, and on the sorting nexins Vps5, Vps17, and Snx3. Several experimental approaches demonstrate that Stx8 is a cargo of the Snx3-retromer. Using extensive truncation and alanine scanning mutagenesis, we identified the Stx8 sorting signal. This signal is an IEMeaM sequence that is located in an unstructured protein region, must be distant from the transmembrane (TM) helix, and where the 133I, 134E, 135M, and 138M residues are all essential for recycling. This sorting motif is different from those described for most retromer cargoes, which include aromatic residues, and resembles the sorting motif of mammalian polycystin-2 (PC2). Comparison of Stx8 and PC2 motifs leads to an IEMxx(I/M) consensus. Computer-assisted screening for this and for a loose Ψ(E/D)ΨXXΨ motif (where Ψ is a hydrophobic residue with large aliphatic chain) shows that syntaxin 8 and PC2 homologues from other organisms bear variation of this motif. The phylogeny of the Stx8 sorting motifs from the Schizosaccharomyces species shows that their divergence is similar to that of the genus, showing that they have undergone evolutionary divergence. A preliminary analysis of the motifs in syntaxin 8 and PC2 sequences from various organisms suggests that they might have also undergone evolutionary divergence, what suggests that the presence of almost-identical motifs in Stx8 and PC2 might be a case of convergent evolution.

摘要

Fsv1/Stx8 是一种类似于哺乳动物突触素 8 的酿酒酵母蛋白。stx8Δ细胞对盐敏感,而前液泡内体(PVE)在 stx8Δ细胞中发生改变。这些缺陷依赖于 SNARE 结构域,这一数据证实了突触素 8 和 Stx8 在 PVE 处囊泡融合中的保守功能。Stx8 定位于反式高尔基体网络(TGN)和前液泡内体(PVE),其回收依赖于 retromer 成分 Vps35,以及分选连接蛋白 Vps5、Vps17 和 Snx3。几种实验方法表明,Stx8 是 Snx3-retromer 的货物。通过广泛的截短和丙氨酸扫描诱变,我们确定了 Stx8 的分选信号。该信号是一个 IEMeaM 序列,位于无结构蛋白区域,必须远离跨膜(TM)螺旋,并且 133I、134E、135M 和 138M 残基对于回收都是必需的。这个分选基序与大多数 retromer 货物的描述不同,它们包括芳香族残基,与哺乳动物多囊蛋白-2(PC2)的分选基序相似。Stx8 和 PC2 基序的比较导致出现 IEMxx(I/M)共识。对该基序和宽松 Ψ(E/D)ΨXXΨ 基序(其中 Ψ 是具有大脂族链的疏水性残基)的计算机辅助筛选表明,来自其他生物体的突触素 8 和 PC2 同源物具有该基序的变体。来自酿酒酵母属的 Stx8 分选基序的系统发育表明,它们的分化与属的分化相似,表明它们经历了进化分化。对来自各种生物体的突触素 8 和 PC2 序列中的基序的初步分析表明,它们也可能经历了进化分化,这表明 Stx8 和 PC2 中几乎相同的基序的存在可能是趋同进化的一个例子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1a94/8041195/e19f13ea06de/pgen.1009463.g001.jpg

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