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双壳贝血蓝蛋白 III 同源二聚体的小角 X 射线散射结构。

SAXS structure of homodimeric oxyHemoglobin III from bivalve Lucina pectinata.

机构信息

Chemistry Department and Industrial Biotechnology Program, University of Puerto Rico, Mayagüez, Puerto Rico.

Natural Sciences Department, University of Puerto Rico, Aguadilla, Puerto Rico.

出版信息

Biopolymers. 2021 Jun;112(6):e23427. doi: 10.1002/bip.23427. Epub 2021 Apr 1.

DOI:10.1002/bip.23427
PMID:33792032
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8265735/
Abstract

Hemoglobin III (HbIII) is one of the two oxygen reactive hemoproteins present in the bivalve, Lucina pectinata. The clam inhabits a sulfur-rich environment and HbIII is the only hemoprotein present in the system which does not yet have a structure described elsewhere. It is known that HbIII exists as a heterodimer with hemoglobin II (HbII) to generate the stable Oxy(HbII-HbIII) complex but it remains unknown if HbIII can form a homodimeric species. Here, a new chromatographic methodology to separate OxyHbIII from the HbII-HbIII dimer has been developed, employing a fast performance liquid chromatography and ionic exchange chromatography column. The nature of OxyHbIII in solution at concentrations from 1.6 mg/mL to 20.4 mg/mL was studied using small angle X-ray scattering (SAXS). The results show that at all concentrations, the Oxy(HbIII-HbIII) dimer dominates in solution. However, as the concentration increases to nonphysiological values, 20.4 mg/mL, HbIII forms a 30% tetrameric fraction. Thus, there is a direct relationship between the Oxy(HbIII-HbIII) oligomeric form and hemoglobin concentration. We suggest it is likely that the OxyHbIII dimer contributes to active oxygen transport in tissues of L pectinata, where the Oxy(HbII-HbIII) complex is not present.

摘要

血红蛋白 III(HbIII)是双壳类软体动物,珠蚌中存在的两种氧反应性血红素蛋白之一。该蚌栖息在富含硫的环境中,HbIII 是该系统中唯一尚未在其他地方描述过结构的血红素蛋白。已知 HbIII 与血红蛋白 II(HbII)形成异二聚体以生成稳定的 Oxy(HbII-HbIII)复合物,但尚不清楚 HbIII 是否可以形成同二聚体。在这里,开发了一种新的色谱方法来分离 OxyHbIII 与 HbII-HbIII 二聚体,采用快速高效液相色谱和离子交换色谱柱。使用小角度 X 射线散射(SAXS)研究了浓度为 1.6mg/mL 至 20.4mg/mL 的 OxyHbIII 在溶液中的性质。结果表明,在所有浓度下,Oxy(HbIII-HbIII)二聚体在溶液中占主导地位。然而,随着浓度增加到非生理值 20.4mg/mL,HbIII 形成 30%的四聚体部分。因此,Oxy(HbIII-HbIII)寡聚形式与血红蛋白浓度之间存在直接关系。我们认为,OxyHbIII 二聚体可能有助于 L pectinata 组织中的活性氧运输,其中不存在 Oxy(HbII-HbIII)复合物。

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Nat Methods. 2018 Mar;15(3):191-193. doi: 10.1038/nmeth.4581. Epub 2018 Jan 29.
3
: a comprehensive data analysis suite for small-angle scattering from macromolecular solutions.用于大分子溶液小角散射的综合数据分析套件。
J Appl Crystallogr. 2017 Jun 26;50(Pt 4):1212-1225. doi: 10.1107/S1600576717007786. eCollection 2017 Aug 1.
4
UCSF ChimeraX: Meeting modern challenges in visualization and analysis.加州大学旧金山分校的ChimeraX:应对可视化与分析中的现代挑战。
Protein Sci. 2018 Jan;27(1):14-25. doi: 10.1002/pro.3235. Epub 2017 Sep 6.
5
Measurement of protein size in concentrated solutions by small angle X-ray scattering.通过小角X射线散射测量浓缩溶液中蛋白质的大小。
Protein Sci. 2016 Aug;25(8):1385-9. doi: 10.1002/pro.2957. Epub 2016 Jun 16.
6
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PLoS One. 2016 Jan 29;11(1):e0147977. doi: 10.1371/journal.pone.0147977. eCollection 2016.
7
Synchrotron-based small-angle X-ray scattering of proteins in solution.基于同步加速器的溶液中蛋白质的小角X射线散射
Nat Protoc. 2014 Jul;9(7):1727-39. doi: 10.1038/nprot.2014.116. Epub 2014 Jun 26.
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Biophys J. 2014 Feb 18;106(4):895-904. doi: 10.1016/j.bpj.2013.12.004.
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J Neurovirol. 2012 Feb;18(1):20-9. doi: 10.1007/s13365-011-0061-2. Epub 2011 Dec 7.
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Biochim Biophys Acta. 2010 Oct;1804(10):1988-95. doi: 10.1016/j.bbapap.2010.06.016. Epub 2010 Jul 1.