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(苦苣苔科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Gesneriaceae).

作者信息

Li Shu, Liao Rui, Xin Zi-Bing, Huang Zhang-Jie, Maciejewski Stephen, Wen Fang

机构信息

Guangxi Key Laboratory of Plant Conservation and Restoration Ecology in Karst Terrain, Guangxi Institute of Botany, Guangxi Zhuang Autonomous Region and Chinese Academy of Sciences, Guilin, PR China.

Gesneriad Conservation Center of China, Guilin Botanical Garden, Chinese Academy of Sciences, Guilin, PR China.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 17;6(3):705-707. doi: 10.1080/23802359.2020.1847607.

DOI:10.1080/23802359.2020.1847607
PMID:33796642
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7971201/
Abstract

Pers. is well known for its floral diversity and widely used in horticulture, but its phylogenetic position is still poorly understood. And most research about the complete chloroplast genome sequence focused on the Old World species; therefore, we think it is necessary to examine taxa of the New World in more detail. This study determined the complete chloroplast genome of H.E. Moore. The cp genome was 153,011 bp in a total length containing two inverted repeats (IRs) of 25,162 bp separated by a large single-copy (LSC) region of 84,669 bp and a small single-copy (SSC) region of 18,018 bp. The whole cp genome of contains 112 genes, including 79 protein-coding genes, 29 genes, and four genes. This plastid genome is firstly reported in the New World Gesneriaceae, which will be a valuable resource for future studies on breeding, conservation genetics, and phylogeny of Gesneriaceae.

摘要

Pers. 以其丰富的花卉多样性而闻名,并广泛应用于园艺领域,但其系统发育位置仍未得到充分了解。大多数关于完整叶绿体基因组序列的研究都集中在旧世界物种上;因此,我们认为有必要更详细地研究新世界的分类群。本研究确定了H.E. Moore的完整叶绿体基因组。该叶绿体基因组全长153,011 bp,包含两个25,162 bp的反向重复序列(IRs),被一个84,669 bp的大单拷贝(LSC)区域和一个18,018 bp的小单拷贝(SSC)区域隔开。该植物的整个叶绿体基因组包含112个基因,包括79个蛋白质编码基因、29个基因和4个基因。这种质体基因组首次在新世界苦苣苔科中报道,这将为苦苣苔科未来的育种、保护遗传学和系统发育研究提供宝贵资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ad8/7971201/113fe8649cd1/TMDN_A_1847607_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ad8/7971201/113fe8649cd1/TMDN_A_1847607_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3ad8/7971201/113fe8649cd1/TMDN_A_1847607_F0001_B.jpg

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本文引用的文献

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Complete chloroplast genome sequence of (Gesneriaceae).(苦苣苔科)的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2019 Jul 29;4(2):2771-2772. doi: 10.1080/23802359.2019.1624208.
2
Distinct Processes Drive Diversification in Different Clades of Gesneriaceae.不同的过程驱动苦苣苔科不同分支的多样化。
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