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(巴巴,1938年)(裸鳃亚目,戈尼多里德科)线粒体全基因组的特征分析

Characterization of the complete mitochondrial genome of (Baba, 1938) (Nudibranchia, Goniodorididae).

作者信息

Dinh Do Thinh, Jung Dae-Wui, Choi Tae-June, An Hyung-Eun, Kim Chang-Bae

机构信息

Department of Biotechnology, Sangmyung University, Seoul, Korea.

Korea Marine-Bio Laboratory, Daejeon, Korea.

出版信息

Mitochondrial DNA B Resour. 2021 Mar 19;6(3):1124-1125. doi: 10.1080/23802359.2021.1901627.

DOI:10.1080/23802359.2021.1901627
PMID:33796762
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7995900/
Abstract

is a speciose genus of the family Goniodorididae with more than 50 valid species. The phylogenetic relationships within the genus are little known. The mitogenome is a good marker to understand the phylogenetic relationships of relative species. This study was performed to sequence the mitogenome of . The mitogenome of was 14,583 bp in size and was composed of 37 genes, including 13 protein-coding genes, two ribosomal genes, and 22 genes. The nucleotide composition was 30.5% A, 13.6% C, 16.5% G, and 39.4% T. The phylogenetic analysis showed that is sister to (Aegiridae). This study recorded the first mitochondrial genome sequence of the family Goniodorididae.

摘要

是角海蛞蝓科中一个物种丰富的属,有50多个有效物种。该属内的系统发育关系鲜为人知。线粒体基因组是了解相关物种系统发育关系的良好标记。本研究旨在对……的线粒体基因组进行测序。……的线粒体基因组大小为14,583 bp,由37个基因组成,包括13个蛋白质编码基因、两个核糖体基因和22个……基因。核苷酸组成为30.5%A、13.6%C、16.5%G和39.4%T。系统发育分析表明,……与(艾氏海蛞蝓科)的……是姐妹关系。本研究记录了角海蛞蝓科的首个线粒体基因组序列。

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本文引用的文献

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PLoS One. 2019 May 1;14(5):e0215037. doi: 10.1371/journal.pone.0215037. eCollection 2019.
2
Aligning evidence: concerns regarding multiple sequence alignments in estimating the phylogeny of the Nudibranchia suborder Doridina.证据比对:关于在估计裸鳃亚目多角海牛亚目的系统发育时多重序列比对的问题。
R Soc Open Sci. 2017 Oct 25;4(10):171095. doi: 10.1098/rsos.171095. eCollection 2017 Oct.
3
PartitionFinder 2: New Methods for Selecting Partitioned Models of Evolution for Molecular and Morphological Phylogenetic Analyses.
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Mol Biol Evol. 2017 Mar 1;34(3):772-773. doi: 10.1093/molbev/msw260.
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Reconstructing mitochondrial genomes directly from genomic next-generation sequencing reads--a baiting and iterative mapping approach.直接从基因组下一代测序读段重建线粒体基因组——一种诱饵和迭代映射方法。
Nucleic Acids Res. 2013 Jul;41(13):e129. doi: 10.1093/nar/gkt371. Epub 2013 May 9.
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