Hoefer Andreas, Boyen Filip, Beierschmitt Amy, Moodley Arshnee, Roberts Marilyn C, Butaye Patrick
School of Veterinary Medicine, Ross University, West Farm 000265, Saint Kitts and Nevis.
Department of Pathology, Bacteriology and Avian Diseases, Faculty of Veterinary Medicine, Ghent University, 9000 Merelbeke, Belgium.
Antibiotics (Basel). 2021 Mar 10;10(3):290. doi: 10.3390/antibiotics10030290.
Antimicrobial resistance has been described in all ecosystems, including wildlife. Here we investigated the presence of methicillin-resistant and susceptible staphylococci in both colony-born and wild vervet monkeys (). Through selective isolation, PCR, MALDI-TOF, and whole-genome sequencing, methicillin-resistant and susceptible spp. isolated from vervet monkeys were characterized. We obtained putatively methicillin-resistant staphylococci from 29 of the 34 nasal samples collected. Strains were identified by MALDI-TOF analysis. ( = 15) was the most commonly isolated species, while nine other species were isolated one or two times. PCR analysis indicated that eight [28%] strains were positive. The whole-genome sequencing [WGS] included eight methicillin-resistant strains ( ( = 2), ( = 3), ( = 2) and ( = 1)), nine additional strains and two strains that could not be identified by MALDI-TOF, but genetically characterized as one and one . Different resistance genes carried by different mobile genetic elements, mainly ( = 10) and (K) ( = 5) were found, while (A), , , , (C), (C) and were identified in one to three strains. Phylogenetic analysis of the strains based on SNPs indicated four clusters associated with colony born or wild. In addition, one singleton isolated did not form a separate group and clustered within other strains submitted to the NCBI. In this study, we demonstrated the presence of AMR and mobile genetic elements to both colony-born and wild vervet monkeys. We also identified a previously undescribed prevalence of in the nasal flora of these monkeys, which merits further investigation.
抗菌耐药性在包括野生动物在内的所有生态系统中都有描述。在此,我们调查了圈养出生和野生的黑长尾猴体内耐甲氧西林和敏感葡萄球菌的存在情况。通过选择性分离、聚合酶链反应(PCR)、基质辅助激光解吸电离飞行时间质谱(MALDI-TOF)和全基因组测序,对从黑长尾猴分离出的耐甲氧西林和敏感葡萄球菌进行了特征分析。我们从采集的34份鼻拭子样本中的29份获得了疑似耐甲氧西林葡萄球菌。通过MALDI-TOF分析鉴定菌株。金黄色葡萄球菌(n = 15)是最常分离出的菌种,而其他9种菌种仅分离出一到两次。PCR分析表明,8株[28%]菌株为mecA阳性。全基因组测序(WGS)包括8株耐甲氧西林菌株(金黄色葡萄球菌(n = 2)、表皮葡萄球菌(n = 3)、溶血葡萄球菌(n = 2)和木糖葡萄球菌(n = 1))、另外9株葡萄球菌菌株以及2株无法通过MALDI-TOF鉴定但经基因特征分析为一株科氏葡萄球菌和一株施氏葡萄球菌的菌株。发现不同的移动遗传元件携带不同的耐药基因,主要是mecA(n = 10)和mecK(n = 5),而mecA、mecB、mecC、mecD、mecE、mecF和mecG在1至3株菌株中被鉴定出来。基于单核苷酸多态性(SNP)对葡萄球菌菌株进行的系统发育分析表明,有四个簇与圈养出生或野生相关。此外,分离出的一株单独的科氏葡萄球菌没有形成一个单独的组,而是聚集在提交给美国国立生物技术信息中心(NCBI)的其他葡萄球菌菌株中。在本研究中,我们证明了圈养出生和野生的黑长尾猴体内均存在抗菌耐药性和移动遗传元件。我们还发现这些猴子鼻腔菌群中存在此前未描述过的mecA流行情况,这值得进一步研究。