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两篇来自埃尔塔蒂奥的古菌宏基因组组装基因组为研究 Crenarchaeota 门提供了新的见解。

Two Archaeal Metagenome-Assembled Genomes from El Tatio Provide New Insights into the Crenarchaeota Phylum.

机构信息

Laboratory of Molecular Applied Biology, Center of Excellence in Translational Medicine, Universidad de La Frontera, Avenida Alemania 0458, Temuco 4810296, Chile.

Scientific and Technological Bioresource Nucleus (BIOREN), Universidad de La Frontera, Temuco 4811230, Chile.

出版信息

Genes (Basel). 2021 Mar 9;12(3):391. doi: 10.3390/genes12030391.

Abstract

A phylogenomic and functional analysis of the first two Crenarchaeota MAGs belonging to El Tatio geysers fields in Chile is reported. A soil sample contiguous to a geothermal activity exposed lagoon of El Tatio was used for shotgun sequencing. Afterwards, contigs were binned into individual population-specific genomes data. A phylogenetic placement was carried out for both MAG 9-5TAT and MAG 47-5TAT. Then functional comparisons and metabolic reconstruction were carried out. Results showed that both MAG 9-5TAT and MAG 47-5TAT likely represent new species in the genus and the genus , respectively. These findings provide new insights into the phylogenetic and genomic diversity for archaea species that inhabit the El Tatio geysers field and expand the understanding of the Crenarchaeota phylum diversity.

摘要

报告了对属于智利埃尔塔蒂奥间歇泉区的前两个 Crenarchaeota MAG 的系统发生基因组学和功能分析。使用来自埃尔塔蒂奥地热活动暴露泻湖附近的土壤样本进行鸟枪法测序。然后,将连续体分为单独的种群特异性基因组数据。对 MAG 9-5TAT 和 MAG 47-5TAT 进行了系统发育定位。然后进行了功能比较和代谢重建。结果表明,MAG 9-5TAT 和 MAG 47-5TAT 可能分别代表属和属中的新种。这些发现为栖息在埃尔塔蒂奥间歇泉区的古菌物种的系统发生和基因组多样性提供了新的见解,并扩展了对 Crenarchaeota 门多样性的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3bed/7999037/fc863f3a21f8/genes-12-00391-g001.jpg

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