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太平洋电鳐中一种新型的类 Rubi 病毒揭示了 Rubi 病毒科的复杂进化史。

A Novel Rubi-Like Virus in the Pacific Electric Ray () Reveals the Complex Evolutionary History of the .

机构信息

Department of Microbiology and Immunology, University of Otago, Dunedin 9016, New Zealand.

Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Life and Environmental Sciences and School of Medical Sciences, University of Sydney, Sydney, NSW 2006, Australia.

出版信息

Viruses. 2021 Mar 31;13(4):585. doi: 10.3390/v13040585.

Abstract

(RuV) is the causative agent of rubella ("German measles") and remains a global health concern. Until recently, RuV was the only known member of the genus and the only virus species classified within the family of positive-sense RNA viruses. Recently, two new rubella-like matonaviruses, and , have been identified in several mammalian species, along with more divergent viruses in fish and reptiles. To screen for the presence of additional novel rubella-like viruses, we mined published transcriptome data using genome sequences from , , and as baits. From this, we identified a novel rubella-like virus in a transcriptome of -order Torpediniformes (Pacific electric ray)-that is more closely related to mammalian than to the divergent fish matonavirus and indicative of a complex pattern of cross-species virus transmission. Analysis of host reads confirmed that the sample analysed was indeed from a Pacific electric ray, and two other viruses identified in this animal, from the and , grouped with other fish viruses. These findings indicate that the evolutionary history of the is more complex than previously thought and highlights the vast number of viruses that remain undiscovered.

摘要

(RuV) 是风疹(“德国麻疹”)的病原体,仍然是全球关注的健康问题。直到最近,RuV 还是属中唯一已知的成员,也是唯一被分类为正链 RNA 病毒家族中的病毒种。最近,两种新的风疹样马顿病毒( 和 )已在几种哺乳动物物种中被发现,鱼类和爬行动物中也存在更多分化的病毒。为了筛选是否存在其他新型风疹样病毒,我们使用 、 和 的基因组序列作为诱饵,从已发表的转录组数据中进行挖掘。由此,我们在 (Order Torpediniformes)(太平洋电鳐)的转录组中发现了一种新型风疹样病毒,该病毒与哺乳动物的亲缘关系比分化的鱼类马顿病毒更密切,表明存在复杂的跨物种病毒传播模式。对宿主读段的分析证实,所分析的样本确实来自太平洋电鳐,而在这种动物中发现的另外两种病毒,分别来自 和 ,与其他鱼类病毒聚为一类。这些发现表明, 的进化历史比之前认为的更为复杂,突显了大量尚未被发现的病毒。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/284c/8067182/5320946e919b/viruses-13-00585-g001.jpg

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