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基于16S核糖体RNA的母乳性黄疸婴儿肠道微生物群组成分析

16S Ribosomal RNA-based Gut Microbiome Composition Analysis in Infants with Breast Milk Jaundice.

作者信息

Duan Miao, Yu Jialin, Feng Jinxing, He Yu, Xiao Sa, Zhu Danping, Zou Zhihui

机构信息

Department of Neonatology, Children's Hospital of Chongqing Medical University, Chongqing, China.

Ministry of Education Key Laboratory of Child Development and Disorders, Chongqing, China.

出版信息

Open Life Sci. 2018 Jun 7;13:208-216. doi: 10.1515/biol-2018-0025. eCollection 2018 Jan.

Abstract

BACKGROUND

This case-control study investigated an association between breast milk jaundice (BMJ) and infants' gut microbiome. The study included determination of the diversity of the gut microbiome and identification of bacterial genera associated with BMJ.

METHODS

The study population consisted of 12 infants with BMJ and 22 breastfed infants without jaundice (control). DNA collected from feces was analyzed by PCR amplification and 1% agarose gel electrophoresis, and then sequenced with a MiSeq system. Relative quantification bioinformatics was employed to analyze the DNA sequencing data. An Illumina high-throughput sequencing platform was used to analyze 16S rRNA variable (V) regions V3 and V4 in stool samples.

RESULTS

In the control group, the proportion of (genus level) in the gut microbiome (64.67%) was significantly higher than that of the BMJ group. However, the prevalence of or in the gut microbiome of the two groups was similar. The Simpson index indicated that the diversity of the bacterial population in the BMJ infants was significantly narrower than in the normal infants.

CONCLUSION

The prevalence of / in the gut of breastfed infants is important for lowering BMJ development.

摘要

背景

本病例对照研究调查了母乳性黄疸(BMJ)与婴儿肠道微生物群之间的关联。该研究包括确定肠道微生物群的多样性以及鉴定与BMJ相关的细菌属。

方法

研究人群包括12例患有BMJ的婴儿和22例无黄疸的母乳喂养婴儿(对照组)。通过PCR扩增和1%琼脂糖凝胶电泳分析从粪便中收集的DNA,然后用MiSeq系统进行测序。采用相对定量生物信息学分析DNA测序数据。使用Illumina高通量测序平台分析粪便样本中的16S rRNA可变(V)区域V3和V4。

结果

在对照组中,肠道微生物群中(属水平)的比例(64.67%)显著高于BMJ组。然而,两组肠道微生物群中或的患病率相似。辛普森指数表明,BMJ婴儿中细菌群体的多样性明显窄于正常婴儿。

结论

母乳喂养婴儿肠道中/的患病率对于降低BMJ的发生很重要。

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