• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

直接检测人锰超氧化物歧化酶中的偶联质子和电子转移。

Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.

机构信息

Department of Biochemistry and Molecular Biology, 985870 Nebraska Medical Center, Omaha, NE, USA.

Eppley Institute for Cancer and Allied Diseases, 986805 Nebraska Medical Center, Omaha, NE, USA.

出版信息

Nat Commun. 2021 Apr 6;12(1):2079. doi: 10.1038/s41467-021-22290-1.

DOI:10.1038/s41467-021-22290-1
PMID:33824320
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8024262/
Abstract

Human manganese superoxide dismutase is a critical oxidoreductase found in the mitochondrial matrix. Concerted proton and electron transfers are used by the enzyme to rid the mitochondria of O. The mechanisms of concerted transfer enzymes are typically unknown due to the difficulties in detecting the protonation states of specific residues and solvent molecules at particular redox states. Here, neutron diffraction of two redox-controlled manganese superoxide dismutase crystals reveal the all-atom structures of Mn and Mn enzyme forms. The structures deliver direct data on protonation changes between oxidation states of the metal. Observations include glutamine deprotonation, the involvement of tyrosine and histidine with altered pKs, and four unusual strong-short hydrogen bonds, including a low barrier hydrogen bond. We report a concerted proton and electron transfer mechanism for human manganese superoxide dismutase from the direct visualization of active site protons in Mn and Mn redox states.

摘要

人锰超氧化物歧化酶是一种存在于线粒体基质中的关键氧化还原酶。该酶利用协同质子和电子转移来清除线粒体中的 O。由于难以检测特定残基和溶剂分子在特定氧化还原状态下的质子化状态,协同转移酶的机制通常是未知的。在这里,两种氧化还原控制的锰超氧化物歧化酶晶体的中子衍射揭示了 Mn 和 Mn 酶形式的全原子结构。这些结构提供了关于金属氧化态之间质子化变化的直接数据。观察结果包括谷氨酰胺去质子化、酪氨酸和组氨酸与改变的 pKs 的参与,以及四个异常强的短氢键,包括一个低势垒氢键。我们从 Mn 和 Mn 氧化还原态中活性位点质子的直接可视化报告了人锰超氧化物歧化酶的协同质子和电子转移机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/a8b7ec09e71f/41467_2021_22290_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/fdda1b639b4c/41467_2021_22290_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/991b21d149e1/41467_2021_22290_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/8430887c2665/41467_2021_22290_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/8a5693e5da83/41467_2021_22290_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/e83be826f75e/41467_2021_22290_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/3e60a9bc6d08/41467_2021_22290_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/a8b7ec09e71f/41467_2021_22290_Fig7_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/fdda1b639b4c/41467_2021_22290_Fig1_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/991b21d149e1/41467_2021_22290_Fig2_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/8430887c2665/41467_2021_22290_Fig3_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/8a5693e5da83/41467_2021_22290_Fig4_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/e83be826f75e/41467_2021_22290_Fig5_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/3e60a9bc6d08/41467_2021_22290_Fig6_HTML.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3611/8024262/a8b7ec09e71f/41467_2021_22290_Fig7_HTML.jpg

相似文献

1
Direct detection of coupled proton and electron transfers in human manganese superoxide dismutase.直接检测人锰超氧化物歧化酶中的偶联质子和电子转移。
Nat Commun. 2021 Apr 6;12(1):2079. doi: 10.1038/s41467-021-22290-1.
2
Revealing the atomic and electronic mechanism of human manganese superoxide dismutase product inhibition.揭示人锰超氧化物歧化酶产物抑制的原子和电子机制。
Nat Commun. 2024 Jul 16;15(1):5973. doi: 10.1038/s41467-024-50260-w.
3
Redox manipulation of the manganese metal in human manganese superoxide dismutase for neutron diffraction.用于中子衍射的人锰超氧化物歧化酶中锰金属的氧化还原操纵。
Acta Crystallogr F Struct Biol Commun. 2018 Oct 1;74(Pt 10):677-687. doi: 10.1107/S2053230X18011299. Epub 2018 Sep 21.
4
The role of Tyr34 in proton coupled electron transfer and product inhibition of manganese superoxide dismutase.酪氨酸34在质子耦合电子转移及锰超氧化物歧化酶产物抑制中的作用
Nat Commun. 2025 Feb 22;16(1):1887. doi: 10.1038/s41467-025-57180-3.
5
Proton-coupled electron transfer in Fe-superoxide dismutase and Mn-superoxide dismutase.铁超氧化物歧化酶和锰超氧化物歧化酶中的质子耦合电子转移
J Inorg Biochem. 2003 Jan 1;93(1-2):71-83. doi: 10.1016/s0162-0134(02)00621-9.
6
Probing the active site of human manganese superoxide dismutase: the role of glutamine 143.探究人类锰超氧化物歧化酶的活性位点:谷氨酰胺143的作用。
Biochemistry. 1998 Apr 7;37(14):4731-9. doi: 10.1021/bi972395d.
7
Coupled redox potentials in manganese and iron superoxide dismutases from reaction kinetics and density functional/electrostatics calculations.基于反应动力学以及密度泛函/静电学计算得出的锰超氧化物歧化酶和铁超氧化物歧化酶中的耦合氧化还原电位
Inorg Chem. 2002 Jan 28;41(2):205-18. doi: 10.1021/ic010355z.
8
Theoretical studies of manganese and iron superoxide dismutases: superoxide binding and superoxide oxidation.锰和铁超氧化物歧化酶的理论研究:超氧化物结合与超氧化物氧化
J Phys Chem B. 2005 Dec 29;109(51):24502-9. doi: 10.1021/jp052368u.
9
QM/MM Calculation of the Enzyme Catalytic Cycle Mechanism for Copper- and Zinc-Containing Superoxide Dismutase.QM/MM 计算含铜锌超氧化物歧化酶的酶催化循环机制。
J Phys Chem B. 2017 Aug 3;121(30):7235-7246. doi: 10.1021/acs.jpcb.7b03589. Epub 2017 Jul 24.
10
Revealing the atomic and electronic mechanism of human manganese superoxide dismutase product inhibition.揭示人类锰超氧化物歧化酶产物抑制的原子和电子机制。
Res Sq. 2024 Feb 5:rs.3.rs-3880128. doi: 10.21203/rs.3.rs-3880128/v1.

引用本文的文献

1
Mapping the Exit Route of Hydrogen Peroxide From the Manganese Superoxide Dismutase (MnSOD) Active Site.绘制过氧化氢从锰超氧化物歧化酶(MnSOD)活性位点的逸出途径。
bioRxiv. 2025 Jul 19:2025.07.17.665311. doi: 10.1101/2025.07.17.665311.
2
Manganese Superoxide Dismutase: Structure, Function, and Implications in Human Disease.锰超氧化物歧化酶:结构、功能及其在人类疾病中的意义
Antioxidants (Basel). 2025 Jul 10;14(7):848. doi: 10.3390/antiox14070848.
3
Metal-organic framework-mediated antioxidant enzyme delivery in disease treatment.

本文引用的文献

1
On the Case of the Misplaced Hydrogens.论氢原子的错位。
Chembiochem. 2021 Jan 15;22(2):288-297. doi: 10.1002/cbic.202000376. Epub 2020 Aug 28.
2
BraggNet: integrating Bragg peaks using neural networks.布拉格网络:使用神经网络整合布拉格峰
J Appl Crystallogr. 2019 Jul 26;52(Pt 4):854-863. doi: 10.1107/S1600576719008665. eCollection 2019 Aug 1.
3
NBO 7.0: New vistas in localized and delocalized chemical bonding theory.NBO 7.0:定域和离域化学键理论的新视角。
金属有机框架介导的抗氧化酶递送在疾病治疗中的应用
Redox Biol. 2025 Jul 18;85:103778. doi: 10.1016/j.redox.2025.103778.
4
Wireless In Situ Catalytic Electron Signaling-Mediated Transcriptomic Reprogramming for Neuron Regeneration via Adaptable Antennas.通过适应性天线实现无线原位催化电子信号介导的转录组重编程以促进神经元再生
Adv Sci (Weinh). 2025 Jul;12(28):e2504786. doi: 10.1002/advs.202504786. Epub 2025 May 11.
5
The role of Tyr34 in proton coupled electron transfer and product inhibition of manganese superoxide dismutase.酪氨酸34在质子耦合电子转移及锰超氧化物歧化酶产物抑制中的作用
Nat Commun. 2025 Feb 22;16(1):1887. doi: 10.1038/s41467-025-57180-3.
6
Metal Ion Signaling in Biomedicine.生物医学中的金属离子信号传导
Chem Rev. 2025 Jan 22;125(2):660-744. doi: 10.1021/acs.chemrev.4c00577. Epub 2025 Jan 2.
7
Why Bestatin Prefers Human Carnosinase 2 (CN2) to Human Carnosinase 1 (CN1).为什么贝司他汀对人肌肽酶2(CN2)的偏好高于人肌肽酶1(CN1)。
J Phys Chem B. 2024 Dec 5;128(48):11876-11884. doi: 10.1021/acs.jpcb.4c05571. Epub 2024 Nov 22.
8
Quantum refinement in real and reciprocal space using the Phenix and ORCA software.使用Phenix和ORCA软件在实空间和倒易空间中进行量子精修。
IUCrJ. 2024 Nov 1;11(Pt 6):921-937. doi: 10.1107/S2052252524008406.
9
Trace Elements in Medicinal Metallomics.药物金属组学中的微量元素
Mini Rev Med Chem. 2025;25(9):664-674. doi: 10.2174/0113895575333766240912162252.
10
Role and mechanisms of mast cells in brain disorders.肥大细胞在脑疾病中的作用和机制。
Front Immunol. 2024 Aug 26;15:1445867. doi: 10.3389/fimmu.2024.1445867. eCollection 2024.
J Comput Chem. 2019 Sep 30;40(25):2234-2241. doi: 10.1002/jcc.25873. Epub 2019 Jun 7.
4
The maximum occupancy condition for the localized property-optimized orbitals.定域优化轨道的最大占据数条件。
Phys Chem Chem Phys. 2019 Feb 27;21(9):5285-5294. doi: 10.1039/c8cp07276k.
5
Improving the accuracy and resolution of neutron crystallographic data by three-dimensional profile fitting of Bragg peaks in reciprocal space.通过在倒易空间对布拉格峰进行三维轮廓拟合来提高中子晶体学数据的精度和分辨率。
Acta Crystallogr D Struct Biol. 2018 Nov 1;74(Pt 11):1085-1095. doi: 10.1107/S2059798318013347. Epub 2018 Oct 29.
6
Catalytic Role of Conserved Asparagine, Glutamine, Serine, and Tyrosine Residues in Isoprenoid Biosynthesis Enzymes.类异戊二烯生物合成酶中保守的天冬酰胺、谷氨酰胺、丝氨酸和酪氨酸残基的催化作用
ACS Catal. 2018 May 4;8(5):4299-4312. doi: 10.1021/acscatal.8b00543. Epub 2018 Apr 6.
7
Redox manipulation of the manganese metal in human manganese superoxide dismutase for neutron diffraction.用于中子衍射的人锰超氧化物歧化酶中锰金属的氧化还原操纵。
Acta Crystallogr F Struct Biol Commun. 2018 Oct 1;74(Pt 10):677-687. doi: 10.1107/S2053230X18011299. Epub 2018 Sep 21.
8
Amide-imide tautomerization in the glutamine side chain in enzymatic and photochemical reactions in proteins.蛋白质中酶促和光化学反应中谷氨酰胺侧链上的酰胺-酰亚胺互变异构。
Phys Chem Chem Phys. 2018 Oct 7;20(37):23827-23836. doi: 10.1039/c8cp04817g. Epub 2018 Sep 11.
9
On the Existence of HeHe Bond in the Endohedral Fullerene Hе @C.关于内嵌富勒烯He@C中HeHe键的存在性
J Comput Chem. 2018 Jul 5;39(18):1090-1102. doi: 10.1002/jcc.25061. Epub 2017 Sep 6.
10
Substrate-analog binding and electrostatic surfaces of human manganese superoxide dismutase.人类锰超氧化物歧化酶的底物类似物结合与静电表面
J Struct Biol. 2017 Jul;199(1):68-75. doi: 10.1016/j.jsb.2017.04.011. Epub 2017 Apr 29.