Department of Microbiology, School of Medicine, Kyungpook National University, Daegu, 41944, Republic of Korea.
Department of Biological Science, College of Science and Engineering, Sangji University, Wonju, 26339, Republic of Korea.
Arch Microbiol. 2021 Aug;203(6):3183-3189. doi: 10.1007/s00203-021-02269-8. Epub 2021 Apr 7.
A yellow-colored bacterial strain, designated S2 was isolated from soil in South Korea. Cells of strain S2 were strictly aerobic, Gram-stain-negative, motile with single polar flagellum, rod-shaped, oxidase and catalase-negative. Growth occurs at 10-37 °C (optimum, 28 °C), pH 5.0-9.0 (optimum, pH 6.5-7.0) and 0-3% NaCl (w/v). Strain S2 consisted of summed feature 3 (iso-C 2-OH and/or C ω7c), C and summed feature 8 (C ω7c and/or C ω6c) as major fatty acids. The sole respiratory quinone was Q-8. The polar lipid profile consisted of phosphatidylethanolamine and an unidentified lipid. The 16S rRNA gene sequence analysis showed that strain S2 is phylogenetically closest to Aquabacterium pictum W35 (98.4% sequence similarity). The genome of strain S2 was 8,039,486 bp with 56 scaffolds. The genome consisted of 10 putative biosynthetic gene clusters that are responsible for various secondary metabolites. Genomic DNA G + C content of strain S2 was 69.4%. The average nucleotide identity and in silico DNA-DNA hybridization values between strain S2 and phylogenetically related taxa were ≤ 77.9 and ≤ 21.4%, and respectively. The results of genotypic and phenotypic data showed that strain S2 could be distinguished from its phylogenetically related species and represents a novel species in the genus Aquabacterium, for which the name Aquabacterium terrae sp. nov. is proposed. The type strain is S2 (= KCTC 72741 = NBRC 114609).
一株黄色的细菌菌株,命名为 S2,从韩国土壤中分离得到。菌株 S2 的细胞为严格需氧、革兰氏阴性、单极鞭毛、杆状、氧化酶和触酶阴性。生长温度为 10-37°C(最适温度为 28°C),pH 值为 5.0-9.0(最适 pH 值为 6.5-7.0),盐度为 0-3%(w/v)。菌株 S2 由 summed feature 3(iso-C 2-OH 和/或 C ω7c)、C 和 summed feature 8(C ω7c 和/或 C ω6c)作为主要脂肪酸组成。唯一的呼吸醌是 Q-8。极性脂谱由磷脂酰乙醇胺和一种未鉴定的脂组成。16S rRNA 基因序列分析表明,菌株 S2 与 Aquabacterium pictum W35 (98.4%序列相似性)在系统发育上最为接近。菌株 S2 的基因组大小为 8,039,486bp,有 56 个支架。基因组由 10 个假定的生物合成基因簇组成,负责各种次生代谢产物。菌株 S2 的基因组 DNA G+C 含量为 69.4%。菌株 S2 与系统发育上相关的分类群之间的平均核苷酸同一性和体外 DNA-DNA 杂交值分别为≤77.9%和≤21.4%。基因型和表型数据的结果表明,菌株 S2 可以与其系统发育上相关的物种区分开来,并代表了 Aquabacterium 属中的一个新物种,因此建议将其命名为 Aquabacterium terrae sp. nov.。模式菌株为 S2(=KCTC 72741=NBRC 114609)。