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T 结构域与最小 C 端对接结构域的合作,使多蛋白 NRPS 能够特异性组装。

Cooperation between a T Domain and a Minimal C-Terminal Docking Domain to Enable Specific Assembly in a Multiprotein NRPS.

机构信息

Molecular Biotechnology, Institute of Molecular Biosciences, Goethe University Frankfurt, 60438, Frankfurt am Main, Germany.

Institute of Molecular Biosciences and Center for Biomolecular Magnetic Resonance (BMRZ), Goethe University Frankfurt, 60438, Frankfurt am Main, Germany.

出版信息

Angew Chem Int Ed Engl. 2021 Jun 14;60(25):14171-14178. doi: 10.1002/anie.202103498. Epub 2021 May 14.

Abstract

Non-ribosomal peptide synthetases (NRPS) produce natural products from amino acid building blocks. They often consist of multiple polypeptide chains which assemble in a specific linear order via specialized N- and C-terminal docking domains ( DDs). Typically, docking domains function independently from other domains in NRPS assembly. Thus, docking domain replacements enable the assembly of "designer" NRPS from proteins that normally do not interact. The multiprotein "peptide-antimicrobial-Xenorhabdus" (PAX) peptide-producing PaxS NRPS is assembled from the three proteins PaxA, PaxB and PaxC. Herein, we show that the small DD of PaxA cooperates with its preceding thiolation (T ) domain to bind the DD of PaxB with very high affinity, establishing a structural and thermodynamical basis for this unprecedented docking interaction, and we test its functional importance in vivo in a truncated PaxS assembly line. Similar docking interactions are apparently present in other NRPS systems.

摘要

非核糖体肽合成酶(NRPS)利用氨基酸构建块生产天然产物。它们通常由多个多肽链组成,这些多肽链通过专门的 N 和 C 末端对接结构域(DD)以特定的线性顺序组装。通常,对接结构域在 NRPS 组装中独立于其他结构域发挥作用。因此,对接结构域的替换能够实现“设计”NRPS 的组装,而这些“设计”NRPS 的组装蛋白通常不会相互作用。多蛋白“肽-抗菌-Xenorhabdus”(PAX)肽产生 PaxS NRPS 由三个蛋白 PaxA、PaxB 和 PaxC 组装而成。本文中,我们表明 PaxA 的小 DD 与其前硫醇化(T)结构域协同作用,以高亲和力结合 PaxB 的 DD,为这种前所未有的对接相互作用建立了结构和热力学基础,并在截断的 PaxS 装配线上测试了其在体内的功能重要性。类似的对接相互作用显然存在于其他 NRPS 系统中。

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