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海膜目(红藻门)某物种的完整线粒体基因组及其与相关物种的比较。

Complete mitochondrial genome of and comparison with related species in Halymeniales (Rhodophyta).

作者信息

Kim Su Yeon, Cho Chung Hyun, Yang Eun Chan, Yoon Hwan Su, Kim Myung Sook

机构信息

Korea Inter-University Institute of Ocean Science, Pukyong National University, Busan, Republic of Korea.

Department of Biological science, Sungkyunkwan University, Suwon, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2021 Apr 8;6(4):1365-1366. doi: 10.1080/23802359.2021.1908866.

DOI:10.1080/23802359.2021.1908866
PMID:33889751
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8043551/
Abstract

is a species of Halymeniales, the fifth species-rich order within Rhodophyta. Using next-generation sequencing techniques, we recovered the complete mitochondrial genome of , i.e. total 26,142 bp in length with 31% GC contents. A total of 49 functional genes were annotated, including 24 protein-coding, 23 transfer RNA, and 2 ribosomal RNA genes. The gene content and synteny have been highly congruent to those of the other halymenialean species, such as , and . Interestingly, the 1 intron and intronic Open Reading Frame (ORF) are absent in , that are existed in the other three halymenialean species.

摘要

是海膜目(Halymeniales)的一个物种,是红藻门(Rhodophyta)中物种丰富度排名第五的目。利用下一代测序技术,我们获得了的完整线粒体基因组,其长度为26,142 bp,GC含量为31%。共注释了49个功能基因,包括24个蛋白质编码基因、23个转运RNA基因和2个核糖体RNA基因。该基因内容和同线性与其他海膜目物种,如和的高度一致。有趣的是,中不存在1个内含子和内含子开放阅读框(ORF),而在其他三个海膜目物种中存在。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/afa3/8043551/1b4966dadb88/TMDN_A_1908866_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/afa3/8043551/1b4966dadb88/TMDN_A_1908866_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/afa3/8043551/1b4966dadb88/TMDN_A_1908866_F0001_B.jpg

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本文引用的文献

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2
tRNAscan-SE On-line: integrating search and context for analysis of transfer RNA genes.tRNAscan-SE在线工具:整合搜索与上下文以分析转运RNA基因
Nucleic Acids Res. 2016 Jul 8;44(W1):W54-7. doi: 10.1093/nar/gkw413. Epub 2016 May 12.
3
Divergence time estimates and the evolution of major lineages in the florideophyte red algae.红藻纲红藻主要谱系的分歧时间估计及演化
Sci Rep. 2016 Feb 19;6:21361. doi: 10.1038/srep21361.
4
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Biol Bull. 2014 Oct;227(2):191-200. doi: 10.1086/BBLv227n2p191.
5
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6
RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models.RAxML-VI-HPC:基于最大似然法的系统发育分析,适用于数千个分类单元及混合模型。
Bioinformatics. 2006 Nov 1;22(21):2688-90. doi: 10.1093/bioinformatics/btl446. Epub 2006 Aug 23.
7
ARAGORN, a program to detect tRNA genes and tmRNA genes in nucleotide sequences.ARAGORN,一个用于在核苷酸序列中检测tRNA基因和tmRNA基因的程序。
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