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COMMD7 高表达是急性髓系白血病的不良预后因素。

High expression of COMMD7 is an adverse prognostic factor in acute myeloid leukemia.

机构信息

Department of Hematology, People's Hospital Affiliated to Ningbo University, Ningbo 315000, China.

Myelodysplastic Syndromes Diagnosis and Therapy Center, The First Affiliated Hospital, Zhejiang University School of Medicine, Hangzhou 310003, China.

出版信息

Aging (Albany NY). 2021 Apr 23;13(8):11988-12006. doi: 10.18632/aging.202901.

Abstract

Acute myeloid leukemia (AML) is a frequent malignancy in adults worldwide; identifying preferable biomarkers has become one of the current challenges. Given that has been reported associated with tumor progression in various human solid cancers but rarely reported in AML, herein, RNA sequencing data from TCGA and GTEx were obtained for analysis of expression and differentially expressed gene (DEG). Furthermore, functional enrichment analysis of -related DEGs was performed by GO/KEGG, GSEA, immune cell infiltration analysis, and protein-protein interaction (PPI) network. In addition, the clinical significance of in AML was figured out by Kaplan-Meier Cox regression and prognostic nomogram model. R package was used to analyze incorporated studies. As a result, was highly expressed in various malignancies, including AML, compared with normal samples. Moreover, high expression of was associated with poor prognosis in 151 AML samples, as well as subgroups with age >60, mutation-positive, mutation-negative, and DNMT3A mutation-negative, et al. ( < 0.05). High was an independent prognostic factor in Cox regression analysis; Age and cytogenetics risk were included in the nomogram prognostic model. Furthermore, a total of 529 DEGs were identified between the high- and the low- expression group, of which 92 genes were up-regulated and 437 genes were down-regulated. Collectively, high expression of is a potential biomarker for adverse outcomes in AML. The DEGs and pathways recognized in the study provide a preliminary grasp of the underlying molecular mechanisms of AML carcinogenesis and progression.

摘要

急性髓细胞白血病(AML)是全球成年人中常见的恶性肿瘤;寻找更好的生物标志物已成为当前的挑战之一。鉴于 已被报道与多种人类实体癌的肿瘤进展相关,但在 AML 中很少报道,在此,从 TCGA 和 GTEx 获得 RNA 测序数据,以分析 的表达和差异表达基因(DEG)。此外,通过 GO/KEGG、GSEA、免疫细胞浸润分析和蛋白质-蛋白质相互作用(PPI)网络对 相关 DEGs 进行功能富集分析。此外,通过 Kaplan-Meier Cox 回归和预后列线图模型确定 在 AML 中的临床意义。使用 R 包分析纳入的研究。结果,与正常样本相比, 在包括 AML 在内的各种恶性肿瘤中高表达。此外,在 151 个 AML 样本中,高表达 与预后不良相关,以及年龄>60、 突变阳性、 突变阴性和 DNMT3A 突变阴性等亚组中,均与预后不良相关(<0.05)。高 是 Cox 回归分析中的独立预后因素;年龄和细胞遗传学风险包含在列线图预后模型中。此外,在高表达和低表达组之间共鉴定出 529 个 DEG,其中 92 个基因上调,437 个基因下调。总之, 高表达是 AML 不良结局的潜在生物标志物。研究中识别的 DEGs 和途径为 AML 发生和进展的潜在分子机制提供了初步认识。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e3b2/8109082/0fa29795ad07/aging-13-202901-g001.jpg

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