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阐明生物肥料对玉米根际土壤细菌多样性的影响。

Elucidating the effect of biofertilizers on bacterial diversity in maize rhizosphere soil.

机构信息

Institute of Applied Chemistry, Shanxi University, Taiyuan, Shanxi Province, China.

Institute of Biotechnology, Shanxi University, Taiyuan, Shanxi Province, China.

出版信息

PLoS One. 2021 Apr 23;16(4):e0249834. doi: 10.1371/journal.pone.0249834. eCollection 2021.

Abstract

This study was conducted to investigate the effect of biofertilizers on the structure and diversity of the rhizosphere bacterial community of maize. Different biofertilizers were applied to maize. The physical and chemical properties of rhizosphere soil samples were analyzed and the rhizosphere bacteria were analyzed by 16S amplicon sequencing. The results showed that treatment with Bacillus licheniformis and B. amyloliquefaciens as biofertilizers increased the soil organic matter (SOM), total nitrogen, total phosphorus (TP), available phosphorus (AP), and available potassium (AK) contents, indicating that the plant growth-promoting rhizobacteria in the biofertilizers might help the host plant to produce root exudates that, in return, recruit beneficial communities due to available sugars, amino acids, organic acids, vitamins, and polymers. The rhizosphere of maize treated with B. subtilis biofertilizer had the highest diversity and richness. However, the rhizosphere treated with the combined bacterial strains had the lowest diversity and richness, which might be due to the directional increase of the abundance of some bacteria with special functions, but the decrease of the overall bacterial community diversity in the soil. The dominant bacterial phyla were Proteobacteria (32.2%-34.6%), Acidobacteria (15.0%-21.0%), Actinobacteria (13.1%-17.2%), and Gemmatimonadetes (9.0%-10.8%), and the dominant bacterial species were Aciditerrimonas ferrireducens JCM 15389 (4.3%-5.2%), Gemmatimonas aurantiaca (3.2%-4.1%), and Pyrinomonas methylaliphatogenes (2.1%-4.8%). The significantly enriched bacterial functions were associated with amino acid metabolism, sugar metabolism, and energy metabolism pathways. The results of a redundancy analysis showed that SOM, TP, and AK were the main factors affecting the microbial community structure in the maize rhizosphere. In conclusion, the application of biofertilizers increased the diversity and richness of the bacterial community in the maize rhizosphere soil. However, combined strain treatment was failed and not an ideal strategy due to the lowest abundance and diversity.

摘要

本研究旨在探讨生物肥料对玉米根际细菌群落结构和多样性的影响。向玉米施加不同的生物肥料,分析根际土壤样品的理化性质,并通过 16S 扩增子测序分析根际细菌。结果表明,添加地衣芽孢杆菌和解淀粉芽孢杆菌作为生物肥料可增加土壤有机质(SOM)、总氮、总磷(TP)、有效磷(AP)和有效钾(AK)含量,表明生物肥料中的植物促生菌可能有助于宿主植物产生根分泌物,进而由于可利用的糖、氨基酸、有机酸、维生素和聚合物,招募有益的群落。用枯草芽孢杆菌生物肥料处理的玉米根际具有最高的多样性和丰富度。然而,用组合细菌菌株处理的根际具有最低的多样性和丰富度,这可能是由于某些具有特殊功能的细菌丰度的定向增加,但土壤中整个细菌群落的多样性降低。优势细菌门为变形菌门(32.2%-34.6%)、酸杆菌门(15.0%-21.0%)、放线菌门(13.1%-17.2%)和芽单胞菌门(9.0%-10.8%),优势细菌种为耐铁酸还原菌 JCM 15389(4.3%-5.2%)、金色单胞菌(3.2%-4.1%)和甲基营养型 Pyrinomonas 菌(2.1%-4.8%)。显著富集的细菌功能与氨基酸代谢、糖代谢和能量代谢途径有关。冗余分析结果表明,SOM、TP 和 AK 是影响玉米根际微生物群落结构的主要因素。综上所述,生物肥料的应用增加了玉米根际土壤细菌群落的多样性和丰富度。然而,由于丰度和多样性最低,组合菌株处理不是一种理想的策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d8eb/8064744/fa6112fe188e/pone.0249834.g001.jpg

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