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催产素-加压素配体和受体家族的通用命名法。

Universal nomenclature for oxytocin-vasotocin ligand and receptor families.

机构信息

Laboratory of Neurogenetics of Language, Rockefeller University, New York, NY, USA.

Section of General Linguistics, University of Barcelona, Barcelona, Spain.

出版信息

Nature. 2021 Apr;592(7856):747-755. doi: 10.1038/s41586-020-03040-7. Epub 2021 Apr 28.

Abstract

Oxytocin (OXT; hereafter OT) and arginine vasopressin or vasotocin (AVP or VT; hereafter VT) are neurotransmitter ligands that function through specific receptors to control diverse functions. Here we performed genomic analyses on 35 species that span all major vertebrate lineages, including newly generated high-contiguity assemblies from the Vertebrate Genomes Project. Our findings support the claim that OT (also known as OXT) and VT (also known as AVP) are adjacent paralogous genes that have resulted from a local duplication, which we infer was through DNA transposable elements near the origin of vertebrates and in which VT retained more of the parental sequence. We identified six major oxytocin-vasotocin receptors among vertebrates. We propose that all six of these receptors arose from a single receptor that was shared with the common ancestor of invertebrates, through a combination of whole-genome and large segmental duplications. We propose a universal nomenclature based on evolutionary relationships for the genes that encode these receptors, in which the genes are given the same orthologous names across vertebrates and paralogous names relative to each other. This nomenclature avoids confusion due to differential naming in the pre-genomic era and incomplete genome assemblies, furthers our understanding of the evolution of these genes, aids in the translation of findings across species and serves as a model for other gene families.

摘要

催产素(OXT;以下简称 OT)和精氨酸加压素或加压素(AVP 或 VT;以下简称 VT)是通过特定受体发挥作用以控制多种功能的神经递质配体。在这里,我们对跨越所有主要脊椎动物谱系的 35 个物种进行了基因组分析,其中包括脊椎动物基因组计划新生成的高连续性组装。我们的研究结果支持了 OT(也称为 OXT)和 VT(也称为 AVP)是相邻的旁系同源基因的说法,这些基因是通过脊椎动物起源附近的 DNA 转座元件发生局部重复而产生的,其中 VT 保留了更多的亲本序列。我们在脊椎动物中鉴定出六种主要的催产素-加压素受体。我们提出,这六种受体都是从与无脊椎动物共同祖先共享的单一受体通过全基因组和大片段重复产生的。我们基于进化关系为编码这些受体的基因提出了通用命名法,其中基因在脊椎动物中具有相同的直系同源名称,而在彼此之间具有旁系同源名称。这种命名法避免了由于前基因组时代和不完全基因组组装而导致的命名差异,有助于我们理解这些基因的进化,有助于在物种间翻译发现,并为其他基因家族提供模型。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9bbe/8081664/496425efbed7/41586_2020_3040_Fig1_HTML.jpg

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