Watanabe Tomoaki, Horiike Tokumasa
United Graduate School of Agricultural Science, Gifu University, Gifu 501-1193, Japan.
Department of Bioresource Sciences, Shizuoka University, Shizuoka 422-8529, Japan.
Biology (Basel). 2021 Apr 14;10(4):329. doi: 10.3390/biology10040329.
Nitrogen fixation plays a crucial role in the nitrogen cycle by helping to convert nitrogen into a form usable by other organisms. Bacteria capable of fixing nitrogen are found in six phyla including Cyanobacteria. Molybdenum dependent nitrogenase () genes are thought to share a single origin as they have homologs in various phyla. However, diazotrophic bacteria have a mosaic distribution within the cyanobacterial lineage. Therefore, the aim of this study was to determine the cause of this mosaic distribution. We identified gene operon structures in the genomes of 85 of the 179 cyanobacterial strains for which whole genome sequences were available. Four operons were conserved in each diazotroph Cyanobacterium, although there were some gene translocations and insertions. Phylogenetic inference of these genes did not reveal horizontal gene transfer from outside the phylum Cyanobacteria. These results support the hypothesis that the mosaic distribution of diazotrophic bacteria in the cyanobacterial lineage is the result of the independent loss of genes inherited from common cyanobacterial ancestors in each lineage.
固氮作用在氮循环中起着关键作用,它有助于将氮转化为其他生物可利用的形式。能够固氮的细菌存在于包括蓝细菌在内的六个门中。依赖钼的固氮酶()基因被认为有单一的起源,因为它们在不同门中都有同源物。然而,固氮细菌在蓝细菌谱系中呈镶嵌分布。因此,本研究的目的是确定这种镶嵌分布的原因。我们在179株有全基因组序列的蓝细菌菌株中的85株基因组中鉴定了基因操纵子结构。尽管存在一些基因易位和插入,但每个固氮蓝细菌中都有四个操纵子是保守的。这些基因的系统发育推断并未揭示来自蓝细菌门之外的水平基因转移。这些结果支持了这样一种假说,即固氮细菌在蓝细菌谱系中的镶嵌分布是每个谱系中从共同蓝细菌祖先遗传而来的基因独立丢失的结果。