Department of Animal Nutrition and Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Pirassununga 13635-900, São Paulo, Brazil.
Department of Animal Nutrition and Production, School of Veterinary Medicine and Animal Science, University of São Paulo, Pirassununga 13635-900, São Paulo, Brazil.
J Dairy Sci. 2021 Aug;104(8):9115-9129. doi: 10.3168/jds.2020-19513. Epub 2021 Apr 30.
This study aimed to evaluate the diagnostic performance (specificity, Sp; sensitivity, Se; accuracy; positive predictive value; negative predictive value; and Cohen's kappa coefficient, κ, of agreement) of chromogenic culture media for rapid identification of microorganisms isolated from cows with clinical (CM) and subclinical mastitis (SCM). For this, 2 experiments were carried out: evaluation of (1) biplate, and (2) triplate of chromogenic culture media for rapid identification of mastitis-causing microorganisms. For the evaluation of diagnostic performance, identification of microorganisms by MALDI-TOF mass spectrometry was considered the standard methodology. In experiment 1, 476 milk samples collected from cows with CM and 660 from cows with SCM were evaluated by inoculation in 2 selective chromogenic culture media (CHROMagar) for gram-positive bacteria and another for gram-negative bacteria. In experiment 2, 476 milk samples from cows with CM and 500 from cows with SCM were evaluated by inoculation in triplate chromogenic culture media (Smartcolor2, Onfarm), selective for Streptococcus and Strep-like organisms, Staphylococcus, and gram-negative bacteria. In experiment 1 for the CM samples, the use of biplates with gram-positive and gram-negative culture media showed Se that ranged from 0.56 (0.32-0.81; Staphylococcus aureus) to 0.90 (0.80-0.99 Streptococcus uberis), Sp varied from 0.94 (0.92-0.96; Strep. uberis) to 1.00 (Prototheca spp. or yeast), and κ ranged from 0.47 (0.26-0.67; Staph. aureus) to 0.84 (0.78-0.9; Escherichia coli). The Se of biplates for SCM samples ranged from 0.50 (0.15-0.85; E. coli) to 0.94 (0.87-1.00; Staph. aureus), Sp varied from 0.95 (0.93-0.97; Strep. uberis) to 0.99 (0.98-1.00; Staph. aureus and Strep. Agalactiae or dysgalactiae), and κ ranged from 0.18 (0.00-0.40; Escherichia coli) to 0.88 (0.80-0.95; Staph. aureus). In experiment 2, the Se of the triplate chromogenic media in CM samples ranged from 0.09 (0.00-0.26; Serratia spp.) to 0.94 (0.85-1.00; Klebsiella spp. and Enterobacter spp.), Sp varied from 0.94 (0.92-0.96; Strep. agalactiae and Strep. dysgalactiae) to 1.00 (Serratia spp.) and κ ranged from 0.07 (0.00-0.24; Serratia spp.) to 0.85 (0.75-0.94; Klebsiella spp. and Enterobacter spp.). For SCM samples, the use of the triplate with the chromogenic culture media showed Se that varied from 0.25 (0.10-0.40; Lactococcus spp.) to 1.00 (Strep. Agalactiae or dysgalactiae), Sp ranged from 0.92 (0.90-0.94; Strep. Agalactiae and Strep. dysgalactiae) to 0.99 (0.98-1.00; Klebsiella spp. and Enterobacter spp.), and κ varied from 0.28 (0.00-0.72; E. coli) to 0.72 (0.60-0.82; Staph. aureus). Our results suggest that the diagnostic accuracy of the biplate and triplate of chromogenic culture media varies according to pathogen, and the results of chromogenic culture media may be useful for rapid decision-making on mastitis treatment protocols of the main mastitis-causing microorganisms, but their use for implementation of mastitis control measures will depend on each farm specific needs.
本研究旨在评估显色培养基对临床(CM)和亚临床(SCM)乳腺炎奶牛分离微生物的快速鉴定的诊断性能(特异性、Sp;敏感性、Se;准确性;阳性预测值;阴性预测值;和一致性的 Cohen's kappa 系数,κ)。为此,进行了两项实验:(1)双板和(2)三板显色培养基快速鉴定乳腺炎病原体微生物的评估。在诊断性能评估中,基质辅助激光解吸电离飞行时间质谱鉴定微生物被认为是标准方法。在实验 1 中,评估了 476 份来自 CM 奶牛的牛奶样本和 660 份来自 SCM 奶牛的牛奶样本,这些样本通过接种两种选择性显色培养基(CHROMagar)进行革兰氏阳性菌和革兰氏阴性菌的培养。在实验 2 中,476 份来自 CM 奶牛的牛奶样本和 500 份来自 SCM 奶牛的牛奶样本通过接种三板显色培养基(Smartcolor2、Onfarm)进行培养,该培养基对链球菌和类链球菌、葡萄球菌和革兰氏阴性菌具有选择性。在实验 1 中,对于 CM 样本,使用革兰氏阳性菌和革兰氏阴性菌的双板培养物显示的 Se 范围为 0.56(0.32-0.81;金黄色葡萄球菌)至 0.90(0.80-0.99 停乳链球菌),Sp 范围为 0.94(0.92-0.96;停乳链球菌)至 1.00(产朊假丝酵母或酵母),κ 范围为 0.47(0.26-0.67;金黄色葡萄球菌)至 0.84(0.78-0.9;大肠杆菌)。SCM 样本的双板培养物的 Se 范围为 0.50(0.15-0.85;大肠杆菌)至 0.94(0.87-1.00;金黄色葡萄球菌),Sp 范围为 0.95(0.93-0.97;停乳链球菌)至 0.99(0.98-1.00;金黄色葡萄球菌和停乳链球菌或无乳链球菌),κ 范围为 0.18(0.00-0.40;大肠杆菌)至 0.88(0.80-0.95;金黄色葡萄球菌)。在实验 2 中,CM 样本中三板显色培养基的 Se 范围为 0.09(0.00-0.26;沙雷氏菌属)至 0.94(0.85-1.00;克雷伯氏菌属和肠杆菌属),Sp 范围为 0.94(0.92-0.96;停乳链球菌和无乳链球菌)至 1.00(沙雷氏菌属),κ 范围为 0.07(0.00-0.24;沙雷氏菌属)至 0.85(0.75-0.94;克雷伯氏菌属和肠杆菌属)。对于 SCM 样本,使用三板显色培养基的 triplate 显示的 Se 范围为 0.25(0.10-0.40;乳球菌属)至 1.00(停乳链球菌或无乳链球菌),Sp 范围为 0.92(0.90-0.94;停乳链球菌和无乳链球菌)至 0.99(0.98-1.00;克雷伯氏菌属和肠杆菌属),κ 范围为 0.28(0.00-0.72;大肠杆菌)至 0.72(0.60-0.82;金黄色葡萄球菌)。我们的结果表明,双板和三板显色培养基的诊断准确性因病原体而异,显色培养基的结果可能有助于快速决策乳腺炎主要病原体的治疗方案,但它们在乳腺炎控制措施中的应用将取决于每个农场的具体需求。