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与缺氧和铁死亡相关的适用于胃癌的 8 基因预后签名。

Eight-gene prognostic signature associated with hypoxia and ferroptosis for gastric cancer with general applicability.

机构信息

Liver Disease Center, The Affiliated Hospital of Qingdao University, No. 59 Haier Road, Qingdao 266003, China.

Qingdao University, No. 308 Ningxia Road, Qingdao 266071, China.

出版信息

Epigenomics. 2021 Jun;13(11):875-890. doi: 10.2217/epi-2020-0411. Epub 2021 May 4.

Abstract

To investigate the prognostic significance of hypoxia- and ferroptosis-related genes for gastric cancer (GC). We extracted data on 259 hypoxia- and ferroptosis-related genes from The Cancer Genome Atlas and identified the differentially expressed genes between normal (n = 32) and tumor (n = 375) tissues. A risk score was established by univariate Cox regression analysis and LASSO penalized Cox regression analysis. The risk score contained eight genes showed good performance in predicting overall survival and relapse-free survival in GC patients in both the training cohort (The Cancer Genome Atlas, n = 350) and the testing cohorts (GSE84437, n = 431; GSE62254, n = 300; GSE15459, n = 191; GSE26253, n = 432). The eight-gene signature may help to the improve the prognostic risk classification of GC.

摘要

为了研究缺氧和铁死亡相关基因对胃癌(GC)的预后意义。我们从癌症基因组图谱(The Cancer Genome Atlas)中提取了 259 个与缺氧和铁死亡相关的基因数据,并鉴定了正常(n=32)和肿瘤(n=375)组织之间的差异表达基因。通过单因素 Cox 回归分析和 LASSO 惩罚 Cox 回归分析建立了风险评分。该风险评分包含 8 个基因,在训练队列(癌症基因组图谱,n=350)和测试队列(GSE84437,n=431;GSE62254,n=300;GSE15459,n=191;GSE26253,n=432)中均能较好地预测 GC 患者的总生存和无复发生存。该 8 基因特征可能有助于改善 GC 的预后风险分类。

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