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XFEL 或同步辐射源的动态结构生物学实验。

Dynamic Structural Biology Experiments at XFEL or Synchrotron Sources.

机构信息

Diamond Light Source Ltd, Didcot, UK.

出版信息

Methods Mol Biol. 2021;2305:203-228. doi: 10.1007/978-1-0716-1406-8_11.

DOI:10.1007/978-1-0716-1406-8_11
PMID:33950392
Abstract

Macromolecular crystallography (MX) leverages the methods of physics and the language of chemistry to reveal fundamental insights into biology. Often beautifully artistic images present MX results to support profound functional hypotheses that are vital to entire life science research community. Over the past several decades, synchrotrons around the world have been the workhorses for X-ray diffraction data collection at many highly automated beamlines. The newest tools include X-ray-free electron lasers (XFELs) located at facilities in the USA, Japan, Korea, Switzerland, and Germany that deliver about nine orders of magnitude higher brightness in discrete femtosecond long pulses. At each of these facilities, new serial femtosecond crystallography (SFX) strategies exploit slurries of micron-size crystals by rapidly delivering individual crystals into the XFEL X-ray interaction region, from which one diffraction pattern is collected per crystal before it is destroyed by the intense X-ray pulse. Relatively simple adaptions to SFX methods produce time-resolved data collection strategies wherein reactions are triggered by visible light illumination or by chemical diffusion/mixing. Thus, XFELs provide new opportunities for high temporal and spatial resolution studies of systems engaged in function at physiological temperature. In this chapter, we summarize various issues related to microcrystal slurry preparation, sample delivery into the X-ray interaction region, and some emerging strategies for time-resolved SFX data collection.

摘要

大分子晶体学(MX)利用物理学的方法和化学的语言来揭示生物学的基本见解。通常,精美的艺术图像呈现 MX 结果,以支持对整个生命科学研究界至关重要的深刻功能假设。在过去的几十年中,世界各地的同步加速器一直是许多高度自动化光束线上 X 射线衍射数据收集的主力军。最新的工具包括位于美国、日本、韩国、瑞士和德国的 X 射线自由电子激光器(XFEL),它们在离散的飞秒长脉冲中提供约九个数量级的更高亮度。在这些设施中的每一个设施中,新的连续飞秒晶体学(SFX)策略都通过将单个晶体快速输送到 XFEL X 射线相互作用区域来利用微米大小晶体的悬浮液,每个晶体在被强 X 射线脉冲破坏之前从该区域收集一个衍射图案。对 SFX 方法进行相对简单的改编可产生时间分辨数据收集策略,其中反应通过可见光照射或化学扩散/混合来触发。因此,XFEL 为在生理温度下参与功能的系统的高时空分辨率研究提供了新的机会。在本章中,我们总结了与微晶体悬浮液制备、样品输送到 X 射线相互作用区域以及时间分辨 SFX 数据收集的一些新兴策略相关的各种问题。

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Anaerobic fixed-target serial crystallography.厌氧固定靶标串行晶体学
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High-Resolution XFEL Structure of the Soluble Methane Monooxygenase Hydroxylase Complex with its Regulatory Component at Ambient Temperature in Two Oxidation States.室温下两种氧化态可溶性甲烷单加氧酶羟化酶复合物与其调控组件的高分辨率 XFEL 结构
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通过连续飞秒晶体学进行超快泵浦探针实验的照明指南。
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The primary structural photoresponse of phytochrome proteins captured by a femtosecond X-ray laser.用飞秒 X 射线激光捕获的光致变色蛋白的主要结构光响应。
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