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超快结构变化指导视觉的第一个分子事件。

Ultrafast structural changes direct the first molecular events of vision.

机构信息

Division of Biology and Chemistry, Laboratory for Biomolecular Research, Paul Scherrer Institute, Villigen PSI, Switzerland.

Photon Science Division, Laboratory for Femtochemistry, Paul Scherrer Institute, Villigen PSI, Switzerland.

出版信息

Nature. 2023 Mar;615(7954):939-944. doi: 10.1038/s41586-023-05863-6. Epub 2023 Mar 22.

Abstract

Vision is initiated by the rhodopsin family of light-sensitive G protein-coupled receptors (GPCRs). A photon is absorbed by the 11-cis retinal chromophore of rhodopsin, which isomerizes within 200 femtoseconds to the all-trans conformation, thereby initiating the cellular signal transduction processes that ultimately lead to vision. However, the intramolecular mechanism by which the photoactivated retinal induces the activation events inside rhodopsin remains experimentally unclear. Here we use ultrafast time-resolved crystallography at room temperature to determine how an isomerized twisted all-trans retinal stores the photon energy that is required to initiate the protein conformational changes associated with the formation of the G protein-binding signalling state. The distorted retinal at a 1-ps time delay after photoactivation has pulled away from half of its numerous interactions with its binding pocket, and the excess of the photon energy is released through an anisotropic protein breathing motion in the direction of the extracellular space. Notably, the very early structural motions in the protein side chains of rhodopsin appear in regions that are involved in later stages of the conserved class A GPCR activation mechanism. Our study sheds light on the earliest stages of vision in vertebrates and points to fundamental aspects of the molecular mechanisms of agonist-mediated GPCR activation.

摘要

视觉是由视蛋白家族的光敏感 G 蛋白偶联受体 (GPCR) 启动的。一个光子被视蛋白中的 11-顺式视黄醛发色团吸收,该发色团在 200 飞秒内异构化为全反式构象,从而启动最终导致视觉的细胞信号转导过程。然而,光激活的视黄醛如何在分子内引发视蛋白内的激活事件的机制在实验上仍不清楚。在这里,我们使用室温下的超快时间分辨晶体学来确定异构化的扭曲全反式视黄醛如何储存光子能量,这些能量是启动与 G 蛋白结合信号状态形成相关的蛋白质构象变化所必需的。光激活后 1 皮秒时的扭曲视黄醛已经与结合口袋中的许多相互作用脱离了一半,多余的光子能量通过朝向细胞外空间的各向异性蛋白质呼吸运动释放。值得注意的是,视蛋白侧链中的非常早期的结构运动出现在涉及保守 A 类 GPCR 激活机制后期阶段的区域。我们的研究揭示了脊椎动物视觉的最早阶段,并指出了激动剂介导的 GPCR 激活的分子机制的基本方面。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fe60/10060157/a5347cde8d90/41586_2023_5863_Fig1_HTML.jpg

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