Díaz-Ordóñez Lorena, Ramírez-Montaño Diana, Candelo Estephania, González-Restrepo Carolina, Silva-Peña Sebastián, Rojas Carlos Arturo, Sepulveda Copete Mario, Echavarria Hector Raul, Pachajoa Harry
Basic Medical Science Department, Faculty of Health Sciences, Universidad Icesi, Cali, Colombia.
Clinical Genetic Department, Fundación Valle del Lili, Cali, Colombia.
Pharmgenomics Pers Med. 2021 Apr 29;14:509-520. doi: 10.2147/PGPM.S285144. eCollection 2021.
is a highly polymorphic gene that encodes an enzyme with the same name and whose function is associated with the metabolism of many important drugs, such as proton pump inhibitors (such as esomeprazole, which is used for the treatment of acid peptic disease). Genetic variants in alter protein function and affect drug metabolism. This study aims to genotypically and phenotypically characterize the genetic variants in the gene in 12 patients with acid peptic disorders and different therapeutic profiles to proton pump inhibitor (PPI) drugs. The patients were randomly selected from a controlled, randomized and blinded clinical pilot trial of 33 patients. We determined the presence and frequency of single nucleotide polymorphisms (SNPs) within exons 1-5 and 9, the intron-exon junctions, and a fragment in the 3' UTR region of the gene using Sanger sequencing. Undescribed polymorphisms were analyzed by free online bioinformatics tools to evaluate the potential molecular effects of these genetic variants.
We identified nine polymorphisms, six of which had no reported functions. One of these genetic variants, with a functional impact, not yet reported (p.Arg132Trp) was predicted by bioinformatic tools as potentially pathogenic. This finding suggests that p.Arg132Trp could be related to poor metabolizers of drugs metabolized by CYP2C19.
We identified the genotype spectrum of variants in . The genotype spectrum of variants in CYP2C19 could predict the treatment response and could support to evaluate clinical efficacy in patients treated with esomeprazole.
CYP2C19是一个高度多态性的基因,编码一种同名酶,其功能与许多重要药物的代谢相关,如质子泵抑制剂(如用于治疗酸相关性疾病的埃索美拉唑)。CYP2C19中的基因变异会改变蛋白质功能并影响药物代谢。本研究旨在对12例患有酸相关性疾病且对质子泵抑制剂(PPI)药物有不同治疗反应的患者的CYP2C19基因变异进行基因分型和表型特征分析。这些患者是从一项针对33例患者的对照、随机和盲法临床试验中随机选取的。我们使用桑格测序法确定了CYP2C19基因外显子1 - 5和9、内含子 - 外显子交界处以及3'UTR区域一个片段内单核苷酸多态性(SNP)的存在和频率。通过免费的在线生物信息学工具对未描述的多态性进行分析,以评估这些基因变异的潜在分子效应。
我们鉴定出9种多态性,其中6种尚无功能报道。这些基因变异之一,具有功能影响且尚未报道(p.Arg132Trp),经生物信息学工具预测可能具有致病性。这一发现表明p.Arg132Trp可能与CYP2C19代谢药物的慢代谢者有关。
我们确定了CYP2C19基因变异的基因型谱。CYP2C19基因变异的基因型谱可以预测治疗反应,并有助于评估接受埃索美拉唑治疗患者的临床疗效。