Wang Han, Ma Zong-Huan, Mao Juan, Chen Bai-Hong
Department of Horticulture, Gansu Agricultural University, Lanzhou, China.
PeerJ. 2021 Apr 21;9:e11176. doi: 10.7717/peerj.11176. eCollection 2021.
EXO70 is the pivotal protein subunit of exocyst, which has a very crucial role in enhancing the shielding effect of the cell wall, resisting abiotic and hormonal stresses. This experiment aims to identify family members of the gene family in grape and predict the characteristics of this gene family, so as to lay the foundation of further exploring the mechanism of resisting abiotic and hormone stresses of . Therefore, the 'Red Globe' tube plantlet were used as materials. Bioinformatics was used to inquire VvEXO70 genes family members, gene structure, system evolution, -acting elements, subcellular and chromosomal localization, collinearity, selective pressure, codon bias and tissue expression. All of VvEXO70s had the conserved pfam03081 domain which maybe necessary for interacting with other proteins. Microarray analysis suggested that most genes expressed to varying degrees in tendrils, leaves, seeds, buds, roots and stems. Quantitative Real-Time PCR (qRT-PCR) showed that the expression levels of all genes with 5 mM salicylic acid (SA), 0.1 mM methy jasmonate (MeJA), 20% PEG6000 and 4 °C for 24 h were higher than for 12 h. With 20% PEG6000 treatment about 24 h, the relative expression of was significantly up-regulated and 361 times higher than CK. All genes' relative expression was higher at 12 h than that at 24 h after treatment with 7 mM hydrogen peroxide (HO) and 0.1 mM ethylene (ETH). In conclusion, the expression levels of 14 genes are distinguishing under these treatments, which play an important role in the regulation of anti-stress signals in grape. All of these test results provide a reference for the future research on the potential function analysis and plant breeding of genes.
EXO70是外泌体的关键蛋白亚基,在增强细胞壁的屏蔽作用、抵抗非生物胁迫和激素胁迫方面具有非常关键的作用。本实验旨在鉴定葡萄中该基因家族的成员并预测该基因家族的特征,以便为进一步探究其抵抗非生物胁迫和激素胁迫的机制奠定基础。因此,以‘红地球’试管苗为材料。利用生物信息学方法查询VvEXO70基因家族成员、基因结构、系统进化、顺式作用元件、亚细胞和染色体定位、共线性、选择压力、密码子偏好性及组织表达情况。所有VvEXO70s均具有保守的pfam03081结构域,这可能是与其他蛋白相互作用所必需的。微阵列分析表明,大多数基因在卷须、叶片、种子、芽、根和茎中均有不同程度的表达。实时定量PCR(qRT-PCR)结果显示,用5 mM水杨酸(SA)、0.1 mM茉莉酸甲酯(MeJA)、20%聚乙二醇6000(PEG6000)处理24 h以及4℃处理24 h后,所有基因的表达水平均高于处理12 h时。用20% PEG6000处理约24 h后,某基因的相对表达量显著上调,比对照高361倍。用7 mM过氧化氢(H₂O₂)和0.1 mM乙烯(ETH)处理后,所有基因在处理12 h时的相对表达量均高于处理24 h时。总之,14个VvEXO70基因在这些处理下的表达水平存在差异,它们在葡萄抗逆信号调控中发挥着重要作用。所有这些试验结果为今后VvEXO70基因的潜在功能分析和植物育种研究提供了参考。