Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, 117997, Russia.
Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, 119992, Russia.
Biochemistry (Mosc). 2021 May;86(5):551-562. doi: 10.1134/S0006297921050047.
It was recently found that the primary transcripts of some microRNA genes (pri-miRNAs) are able to express peptides with 12 to 40 residues in length. These peptides, called miPEPs, participate in the transcriptional regulation of their own pri-miRNAs. In our previous studies, we used bioinformatic approach for comparative analysis of pri-miRNA sequences in plant genomes to identify a new group of miPEPs (miPEP-156a peptides) encoded by pri-miR156a in several dozen species of the Brassicaceae family. Exogenous miPEP-156a peptides could efficiently penetrate into the plant seedlings through the root system and spread systemically to the leaves. The peptides produced moderate morphological effect accelerating primary root growth. In parallel, the miPEP-156a peptides upregulated expression of their own pri-miR156a. Importantly, the observed effects at both morphological and molecular levels correlated with the peptide ability to quickly translocate into the cell nucleus and to bind chromatin. In this work, we established secondary structure of the miPEP-156a and demonstrated its changes induced by formation of the peptide complex with DNA.
最近发现,一些 microRNA 基因(pri-miRNAs)的初级转录本能够表达 12 到 40 个残基长度的肽。这些肽被称为 miPEPs,参与自身 pri-miRNAs 的转录调控。在我们之前的研究中,我们使用生物信息学方法对植物基因组中 pri-miRNA 序列进行比较分析,以鉴定由十几个拟南芥科物种的 pri-miR156a 编码的一组新的 miPEPs(miPEP-156a 肽)。外源性的 miPEP-156a 肽可以通过根系有效地进入植物幼苗,并在植物体内系统地扩散到叶片中。这些肽产生了适度的形态效应,加速了主根的生长。同时,miPEP-156a 肽上调了自身 pri-miR156a 的表达。重要的是,在形态和分子水平上观察到的效应与肽快速易位到细胞核并与染色质结合的能力相关。在这项工作中,我们建立了 miPEP-156a 的二级结构,并证明了它与 DNA 形成肽复合物所引起的结构变化。