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脯氨酸生物合成酶吡咯啉-5-羧酸还原酶(PYCR)的结构、生物化学和基因表达模式,这是一个新兴的癌症治疗靶点。

Structure, biochemistry, and gene expression patterns of the proline biosynthetic enzyme pyrroline-5-carboxylate reductase (PYCR), an emerging cancer therapy target.

机构信息

Department of Biochemistry, University of Missouri, Columbia, MO, 65211, USA.

Department of Chemistry, University of Missouri, Columbia, MO, 65211, USA.

出版信息

Amino Acids. 2021 Dec;53(12):1817-1834. doi: 10.1007/s00726-021-02999-5. Epub 2021 May 18.

Abstract

Proline metabolism features prominently in the unique metabolism of cancer cells. Proline biosynthetic genes are consistently upregulated in multiple cancers, while the proline catabolic enzyme proline dehydrogenase has dual, context-dependent pro-cancer and pro-apoptotic functions. Furthermore, the cycling of proline and Δ-pyrroline-5-carboxylate through the proline cycle impacts cellular growth and death pathways by maintaining redox homeostasis between the cytosol and mitochondria. Here we focus on the last enzyme of proline biosynthesis, Δ-pyrroline-5-carboxylate reductase, known as PYCR in humans. PYCR catalyzes the NAD(P)H-dependent reduction of Δ-pyrroline-5-carboxylate to proline and forms the reductive half of the proline metabolic cycle. We review the research on the three-dimensional structure, biochemistry, inhibition, and cancer biology of PYCR. To provide a global view of PYCR gene upregulation in cancer, we mined RNA transcript databases to analyze differential gene expression in 28 cancer types. This analysis revealed strong, widespread upregulation of PYCR genes, especially PYCR1. Altogether, the research over the past 20 years makes a compelling case for PYCR as a cancer therapy target. We conclude with a discussion of some of the major challenges for the field, including developing isoform-specific inhibitors, elucidating the function of the long C-terminus of PYCR1/2, and characterizing the interactome of PYCR.

摘要

脯氨酸代谢在癌细胞的独特代谢中起着重要作用。脯氨酸生物合成基因在多种癌症中持续上调,而脯氨酸分解代谢酶脯氨酸脱氢酶具有双重、依赖于上下文的促癌和促凋亡功能。此外,脯氨酸和Δ-吡咯啉-5-羧酸通过脯氨酸循环的循环通过维持细胞质和线粒体之间的氧化还原平衡来影响细胞生长和死亡途径。在这里,我们专注于脯氨酸生物合成的最后一个酶,即Δ-吡咯啉-5-羧酸还原酶,在人类中称为 PYCR。PYCR 催化 NAD(P)H 依赖性将 Δ-吡咯啉-5-羧酸还原为脯氨酸,并形成脯氨酸代谢循环的还原半部分。我们回顾了 PYCR 的三维结构、生物化学、抑制和癌症生物学研究。为了提供 PYCR 在癌症中基因上调的全局视图,我们挖掘了 RNA 转录数据库,以分析 28 种癌症类型中的差异基因表达。这项分析显示,PYCR 基因,特别是 PYCR1 的表达强烈且广泛上调。总之,过去 20 年的研究有力地证明了 PYCR 是癌症治疗的一个靶点。我们最后讨论了该领域的一些主要挑战,包括开发同工酶特异性抑制剂、阐明 PYCR1/2 长 C 末端的功能以及表征 PYCR 的互作组。

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