Huo Xiao, Sun Hengzi, Liu Shuangwu, Liang Bing, Bai Huimin, Wang Shuzhen, Li Shuhong
Peking University Third Hospital Institute of Medical Innovation and Research, Beijing, China.
Department of Obstetrics and Gynecology, Beijing Chao-Yang Hospital, Capital Medical University, Beijing, China.
Front Genet. 2021 May 13;12:680413. doi: 10.3389/fgene.2021.680413. eCollection 2021.
: Ovarian cancer is highly malignant and has a poor prognosis in the advanced stage. Studies have shown that infiltration of tumor microenvironment cells, immune cells and stromal cells has an important impact on the prognosis of cancers. However, the relationship between tumor microenvironment genes and the prognosis of ovarian cancer has not been studied. : Gene expression profiles and SNP data of ovarian cancer were downloaded from the TCGA database. Cluster analysis, WGCNA analysis and univariate survival analysis were used to identify immune microenvironment genes as prognostic signatures for predicting the survival of ovarian cancer patients. External data were used to evaluate the signature. Moreover, the top five significantly correlated genes were evaluated by immunohistochemical staining of ovarian cancer tissues. : We systematically analyzed the relationship between ovarian cancer and immune metagenes. Immune metagenes expression were associated with prognosis. In total, we identified 10 genes related to both immunity and prognosis in ovarian cancer according to the expression of immune metagenes. These data reveal that high expression of ETV7 (OS, HR = 1.540, 95% CI 1.023-2.390, = 0.041), GBP4 (OS, HR = 1.834, 95% CI 1.242-3.055, = 0.004), CXCL9 (OS, HR = 1.613, 95% CI 1.080 -2.471, = 0.021), CD3E (OS, HR = 1.590, 95% CI 1.049 -2.459, = 0.031), and TAP1 (OS, HR = 1.766, 95% CI 1.163 -2.723, = 0.009) are associated with better prognosis in patients with ovarian cancer. : Our study identified 10 immune microenvironment genes related to the prognosis of ovarian cancer. The list of tumor microenvironment-related genes provides new insights into the underlying biological mechanisms driving the tumorigenesis of ovarian cancer.
卵巢癌具有高度恶性,晚期预后较差。研究表明,肿瘤微环境细胞、免疫细胞和基质细胞的浸润对癌症预后有重要影响。然而,肿瘤微环境基因与卵巢癌预后之间的关系尚未得到研究。:从TCGA数据库下载卵巢癌的基因表达谱和SNP数据。采用聚类分析、WGCNA分析和单因素生存分析来鉴定免疫微环境基因,作为预测卵巢癌患者生存的预后特征。利用外部数据评估该特征。此外,通过对卵巢癌组织进行免疫组化染色,对排名前五位的显著相关基因进行评估。:我们系统地分析了卵巢癌与免疫元基因之间的关系。免疫元基因表达与预后相关。根据免疫元基因的表达,我们总共鉴定出10个与卵巢癌免疫和预后相关的基因。这些数据表明,ETV7(总生存期,风险比=1.540,95%可信区间1.023 - 2.390,P=0.041)、GBP4(总生存期,风险比=1.834,95%可信区间1.242 - 3.055,P=0.004)、CXCL9(总生存期,风险比=1.613,95%可信区间1.080 - 2.471,P=0.021)、CD3E(总生存期,风险比=1.590,95%可信区间1.049 - 2.459,P=0.031)和TAP1(总生存期,风险比=1.766,95%可信区间1.163 - 2.723,P=0.009)的高表达与卵巢癌患者较好的预后相关。:我们的研究鉴定出10个与卵巢癌预后相关的免疫微环境基因。肿瘤微环境相关基因列表为驱动卵巢癌发生的潜在生物学机制提供了新的见解。