Lamichhane-Khadka Reena, Dulal Santosh, Cuaron Jesus A, Pfeltz Richard, Gupta Sushim Kumar, Wilkinson Brian J, Gustafson John E
Department of Biology, New Mexico State University, Las Cruces, NM 88003, USA.
Department of Biology, Saint Mary's College, Notre Dame, IN 46556, USA.
Antibiotics (Basel). 2021 May 14;10(5):583. doi: 10.3390/antibiotics10050583.
Comparative genomic sequencing of laboratory-derived vancomycin-intermediate (VISA) (MM66-3 and MM66-4) revealed unique mutations in both MM66-3 (in and ), and MM66-4 (in and ), compared to hetero-VISA parent strain MM66. Transcriptional profiling revealed that both MM66 VISA shared 79 upregulated genes and eight downregulated genes. Of these, 30.4% of the upregulated genes were associated with the cell envelope, whereas 75% of the downregulated genes were associated with virulence. In concordance with mutations and transcriptome alterations, both VISA strains demonstrated reduced autolysis, reduced growth in the presence of salt and reduced virulence factor activity. In addition to mutations in genes linked to cell wall metabolism ( and ), the same mutation in which encodes adenine phosphoribosyltransferase, was confirmed in both MM66 VISA. Apt plays a role in both adenine metabolism and accumulation and both MM66 VISA grew better than MM66 in the presence of adenine or 2-fluoroadenine indicating a reduction in the accumulation of these growth inhibiting compounds in the VISA strains. MM66 mutants isolated via 2-fluoroadenine selection also demonstrated reduced susceptibility to the cell wall lytic dye Congo red and vancomycin. Finding that mutations contribute to reduced vancomycin susceptibility once again suggests a role for altered purine metabolism in a VISA mechanism.
对实验室衍生的万古霉素中介(VISA)菌株(MM66 - 3和MM66 - 4)进行比较基因组测序发现,与异质性VISA亲本菌株MM66相比,MM66 - 3(在[具体基因1]和[具体基因2]中)以及MM66 - 4(在[具体基因3]和[具体基因4]中)存在独特的突变。转录谱分析表明,两种MM66 VISA菌株共有79个上调基因和8个下调基因。其中,30.4%的上调基因与细胞包膜相关,而75%的下调基因与毒力相关。与突变和转录组改变相一致,两种VISA菌株均表现出自溶减少、在盐存在下生长减少以及毒力因子活性降低。除了与细胞壁代谢相关基因([具体基因5]和[具体基因6])的突变外,在编码腺嘌呤磷酸核糖转移酶的[具体基因7]中,两种MM66 VISA菌株均确认存在相同突变。Apt在腺嘌呤代谢和积累中均起作用,并且在腺嘌呤或2 - 氟腺嘌呤存在下,两种MM66 VISA菌株的生长均优于MM66,这表明VISA菌株中这些生长抑制化合物的积累减少。通过2 - 氟腺嘌呤选择分离出的MM66突变体对细胞壁裂解染料刚果红和万古霉素的敏感性也降低。发现[具体基因7]突变导致万古霉素敏感性降低再次表明嘌呤代谢改变在VISA机制中发挥作用。