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巴西巴拉那州自由生活野猪中的猪圆环病毒3a田间毒株

Porcine Circovirus 3a Field Strains in Free-Living Wild Boars in Paraná State, Brazil.

作者信息

Souza Tatiana Carolina Gomes Dutra de, Gava Danielle, Schaefer Rejane, Leme Raquel Arruda, Porto Gisele da Silva, Alfieri Amauri Alcindo

机构信息

Laboratory of Animal Virology, Department of Veterinary Preventive Medicine, State University of Londrina, Rodovia Celso Garcia Cid-Campos Universitário, Londrina 86057-970, PR, Brazil.

Embrapa Suínos e Aves, Concórdia 89715-899, SC, Brazil.

出版信息

Animals (Basel). 2021 May 31;11(6):1634. doi: 10.3390/ani11061634.

Abstract

Porcine circovirus 3 (PCV-3) was identified in domestic pigs worldwide. Although PCV-3 has also been detected in wild boars, information regarding its circulation in this free-living animal species is scarce. To investigate PCV-3 occurrence in free-living wild boars in Brazil, 70 serum samples collected between January 2017 and June 2019 in Paraná state, Brazil were analyzed by PCR assay. Amplicons measuring 330 bp in length were amplified in seven (10.0%) of the serum samples and confirmed to be PCV3-specific by nucleotide (nt) sequencing. As the amplified products from the serum samples yielded only intermediate levels of viral DNA, lung samples from the seven PCR-positive wild boars were also evaluated by PCR. Of these samples, five lung samples were positive and provided high levels of viral DNA. The three lung samples that presented the highest levels of viral DNA were selected for amplification and sequencing of the whole PCV-3 genome. The three full-length sequences obtained were grouped in PCV-3 clade "a", and the sequences exhibited 100% nucleotide similarity among them. The PCV-3 field strains of this study showed nucleotide and amino acid similarities of 98.5-99.8% and 98.8-100%, respectively, with whole-genome PCV-3 sequences from around the world.

摘要

猪圆环病毒3型(PCV - 3)在全球家猪中均有发现。尽管在野猪中也检测到了PCV - 3,但关于其在这种自由生活的动物物种中传播的信息却很少。为了调查巴西自由生活的野猪中PCV - 3的感染情况,对2017年1月至2019年6月期间在巴西巴拉那州采集的70份血清样本进行了PCR检测分析。在7份(10.0%)血清样本中扩增出了长度为330 bp的扩增子,并通过核苷酸(nt)测序确认其为PCV3特异性扩增子。由于血清样本的扩增产物仅产生中等水平的病毒DNA,因此还对7头PCR阳性野猪的肺样本进行了PCR检测。在这些样本中,5份肺样本呈阳性,并提供了高水平的病毒DNA。选择病毒DNA水平最高的3份肺样本进行PCV - 3全基因组的扩增和测序。获得的3条全长序列被归类为PCV - 3进化枝“a”,这些序列之间的核苷酸相似度为100%。本研究中的PCV - 3田间毒株与来自世界各地的PCV - 3全基因组序列相比,核苷酸和氨基酸相似度分别为98.5 - 99.8%和98.8 - 100%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/86d7/8227967/8c5967c9fb50/animals-11-01634-g001.jpg

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