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雏鸟出飞时的甲基化模式预测了一种合作繁殖鸟类的延迟扩散。

Methylation patterns at fledging predict delayed dispersal in a cooperatively breeding bird.

机构信息

Department of Biology, University of South Dakota, Vermillion, South Dakota, United States of America.

Centre for Ecology and Conservation, University of Exeter, Penryn, Cornwall, United Kingdom.

出版信息

PLoS One. 2021 Jun 4;16(6):e0252227. doi: 10.1371/journal.pone.0252227. eCollection 2021.

Abstract

Individuals may delay dispersing from their natal habitat, even after maturation to adulthood. Such delays can have broad consequences from determining population structure to allowing an individual to gain indirect fitness by helping parents rear future offspring. Dispersal in species that use delayed dispersal is largely thought to be opportunistic; however, how individuals, particularly inexperienced juveniles, assess their environments to determine the appropriate time to disperse is unknown. One relatively unexplored possibility is that dispersal decisions are the result of epigenetic mechanisms interacting between a genome and environment during development to generate variable dispersive phenotypes. Here, we tested this using epiRADseq to compare genome-wide levels of DNA methylation of blood in cooperatively breeding chestnut-crowned babblers (Pomatostomus ruficeps). We measured dispersive and philopatric individuals at hatching, before fledging, and at 1 year (following when first year dispersal decisions would be made). We found that individuals that dispersed in their first year had a reduced proportion of methylated loci than philopatric individuals before fledging, but not at hatching or as adults. Further, individuals that dispersed in the first year had a greater number of loci change methylation state (i.e. gain or lose) between hatching and fledging. The existence and timing of these changes indicate some influence of development on epigenetic changes that may influence dispersal behavior. However, further work needs to be done to address exactly how developmental environments may be associated with dispersal decisions and which loci in particular are manipulated to generate such changes.

摘要

个体可能会延迟离开其出生地,即使已经成熟到成年期。这种延迟会产生广泛的后果,从确定种群结构到允许个体通过帮助父母抚养未来的后代来获得间接适应度。在使用延迟扩散的物种中,扩散在很大程度上被认为是机会主义的;然而,个体,特别是没有经验的幼体,如何评估其环境以确定适当的扩散时间,目前尚不清楚。一个相对未被探索的可能性是,扩散决策是由发育过程中基因组和环境之间的表观遗传机制相互作用产生的,从而产生可变的扩散表型。在这里,我们使用 epiRADseq 来测试这一点,以比较合作繁殖的栗冠鹦鹉(Pomatostomus ruficeps)血液中的全基因组水平的 DNA 甲基化。我们在孵化、离巢前和 1 岁(在做出第一年的扩散决定后)时测量了扩散和恋巢个体。我们发现,在第一年扩散的个体在离巢前的甲基化位点比例低于恋巢个体,但在孵化或成年时则不然。此外,在孵化和离巢之间,有更多的个体改变了甲基化状态(即获得或失去)的位点数量。这些变化的存在和时间表明,发育对可能影响扩散行为的表观遗传变化有一定的影响。然而,需要进一步的工作来确定发育环境究竟如何与扩散决策相关,以及哪些特定的基因座被操纵以产生这种变化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/915f/8177507/0ff05befbab2/pone.0252227.g001.jpg

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