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靶向新一代测序与先天性溶血性贫血的诊断:一项三年单中心经验研究

Targeted Next Generation Sequencing and Diagnosis of Congenital Hemolytic Anemias: A Three Years Experience Monocentric Study.

作者信息

Fermo Elisa, Vercellati Cristina, Marcello Anna Paola, Keskin Ebru Yilmaz, Perrotta Silverio, Zaninoni Anna, Brancaleoni Valentina, Zanella Alberto, Giannotta Juri A, Barcellini Wilma, Bianchi Paola

机构信息

UOS Fisiopatologia delle Anemie, UOC Ematologia, Fondazione IRCCS Ca' Granda Ospedale Maggiore Policlinico, Milan, Italy.

Department of Pediatric Hematology and Oncology, Suleyman Demirel University, Isparta, Turkey.

出版信息

Front Physiol. 2021 May 21;12:684569. doi: 10.3389/fphys.2021.684569. eCollection 2021.

Abstract

Congenital hemolytic anemias (CHAs) are heterogeneous and rare disorders caused by alterations in structure, membrane transport, metabolism, or red blood cell production. The pathophysiology of these diseases, in particular the rarest, is often poorly understood, and easy-to-apply tools for diagnosis, clinical management, and patient stratification are still lacking. We report the 3-years monocentric experience with a 43 genes targeted Next Generation Sequencing (t-NGS) panel in diagnosis of CHAs; 122 patients from 105 unrelated families were investigated and the results compared with conventional laboratory pathway. Patients were divided in two groups: 1) cases diagnosed with hematologic investigations to be confirmed at molecular level, and 2) patients with unexplained anemia after extensive hematologic investigation. The overall sensitivity of t-NGS was 74 and 35% for families of groups 1 and 2, respectively. Inside this cohort of patients we identified 26 new pathogenic variants confirmed by functional evidence. The implementation of laboratory work-up with t-NGS increased the number of diagnoses in cases with unexplained anemia; cytoskeleton defects are well detected by conventional tools, deserving t-NGS to atypical cases; the diagnosis of Gardos channelopathy, some enzyme deficiencies, familial siterosterolemia, X-linked defects in females and other rare and ultra-rare diseases definitely benefits of t-NGS approaches.

摘要

先天性溶血性贫血(CHAs)是由结构、膜转运、代谢或红细胞生成改变引起的异质性罕见疾病。这些疾病的病理生理学,尤其是最罕见的那些,通常了解甚少,目前仍缺乏易于应用的诊断、临床管理和患者分层工具。我们报告了一项为期3年的单中心经验,该经验使用一个针对43个基因的二代测序(t-NGS)panel来诊断CHAs;对来自105个无关家庭的122例患者进行了研究,并将结果与传统实验室检测方法进行了比较。患者分为两组:1)通过血液学检查诊断但需在分子水平进行确认的病例,以及2)经过广泛血液学检查后仍原因不明的贫血患者。t-NGS对第1组和第2组家庭的总体敏感性分别为74%和35%。在这组患者中,我们鉴定出26个经功能证据证实的新的致病变异。采用t-NGS进行实验室检查增加了原因不明贫血病例的诊断数量;传统工具能很好地检测出细胞骨架缺陷,t-NGS适用于非典型病例;对于加尔多斯通道病、某些酶缺乏症、家族性谷甾醇血症、女性X连锁缺陷以及其他罕见和超罕见疾病的诊断,t-NGS方法无疑具有优势。

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