Chang Changgee, Jang Jeong Hoon, Manatunga Amita, Taylor Andrew T, Long Qi
Department of Biostatistics, Epidemiology, and Informatics, University of Pennsylvania.
Department of Biostatistics and Bioinformatics, Emory University.
J Am Stat Assoc. 2020;115(532):1645-1663. doi: 10.1080/01621459.2019.1689983. Epub 2020 Jan 6.
Kidney obstruction, if untreated in a timely manner, can lead to irreversible loss of renal function. A widely used technology for evaluations of kidneys with suspected obstruction is diuresis renography. However, it is generally very challenging for radiologists who typically interpret renography data in practice to build high level of competency due to the low volume of renography studies and insufficient training. Another challenge is that there is currently no gold standard for detection of kidney obstruction. Seeking to develop a computer-aided diagnostic (CAD) tool that can assist practicing radiologists to reduce errors in the interpretation of kidney obstruction, a recent study collected data from diuresis renography, interpretations on the renography data from highly experienced nuclear medicine experts as well as clinical data. To achieve the objective, we develop a statistical model that can be used as a CAD tool for assisting radiologists in kidney interpretation. We use a Bayesian latent class modeling approach for predicting kidney obstruction through the integrative analysis of time-series renogram data, expert ratings, and clinical variables. A nonparametric Bayesian latent factor regression approach is adopted for modeling renogram curves in which the coefficients of the basis functions are parameterized via the factor loadings dependent on the latent disease status and the extended latent factors that can also adjust for clinical variables. A hierarchical probit model is used for expert ratings, allowing for training with rating data from multiple experts while predicting with at most one expert, which makes the proposed model operable in practice. An efficient MCMC algorithm is developed to train the model and predict kidney obstruction with associated uncertainty. We demonstrate the superiority of the proposed method over several existing methods through extensive simulations. Analysis of the renal study also lends support to the usefulness of our model as a CAD tool to assist less experienced radiologists in the field.
肾脏梗阻若不及时治疗,可导致肾功能不可逆转的丧失。一种广泛用于评估疑似梗阻肾脏的技术是利尿肾图。然而,由于肾图研究数量少且培训不足,在实践中通常解读肾图数据的放射科医生要建立高水平的专业能力通常非常具有挑战性。另一个挑战是目前尚无检测肾脏梗阻的金标准。为了开发一种计算机辅助诊断(CAD)工具,以协助执业放射科医生减少在肾脏梗阻解读中的错误,最近一项研究收集了利尿肾图数据、经验丰富的核医学专家对肾图数据的解读以及临床数据。为实现这一目标,我们开发了一种统计模型,可作为CAD工具来协助放射科医生进行肾脏解读。我们使用贝叶斯潜在类别建模方法,通过对时间序列肾图数据、专家评级和临床变量的综合分析来预测肾脏梗阻。采用非参数贝叶斯潜在因子回归方法对肾图曲线进行建模,其中基函数的系数通过依赖于潜在疾病状态的因子载荷以及也可调整临床变量的扩展潜在因子进行参数化。使用分层概率模型对专家评级进行处理,允许使用来自多个专家的评级数据进行训练,同时最多使用一个专家进行预测,这使得所提出的模型在实践中可行。开发了一种高效的马尔可夫链蒙特卡罗(MCMC)算法来训练模型并预测肾脏梗阻及其相关的不确定性。我们通过广泛的模拟证明了所提出方法优于几种现有方法。对肾脏研究的分析也支持了我们的模型作为CAD工具在协助该领域经验不足的放射科医生方面的有用性。