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(马鞭草科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Verbenaceae).

作者信息

Song Wei-Cai, Feng Qi, Zhang Yun-Jiao, Wu Xiao-Meng, Shi Chao, Wang Shuo

机构信息

College of Marine Science and Biological Engineering, Qingdao University of Science and Technology, Qingdao, China.

Kunming Medical University Haiyuan College, Kunming, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jun 3;6(7):1832-1833. doi: 10.1080/23802359.2021.1934164.

DOI:10.1080/23802359.2021.1934164
PMID:34124359
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8183526/
Abstract

In this study, the complete chloroplast (cp) genome of was assembled using Illumina sequencing data. The complete cp genome is 149,869 bp in length, including a pair of invert repeats (IRA and IRB) regions of 22,839 bp, large single-copy (LSC) region of 86,201 bp, and small single-copy (SSC) region of 17,990 bp. The G + C content of this cp genome was 38.26%. A total of 128 genes were predicted in the genome, including 83 protein-coding genes, 37 tRNA genes, and eight rRNA genes. Phylogenetic analysis confirmed the phylogenetic relationship between and other representative species of Verbenaceae.

摘要

在本研究中,利用Illumina测序数据组装了[物种名称]的完整叶绿体(cp)基因组。完整的cp基因组长度为149,869 bp,包括一对长度为22,839 bp的反向重复序列(IRA和IRB)区域、一个长度为86,201 bp的大单拷贝(LSC)区域和一个长度为17,990 bp的小单拷贝(SSC)区域。该cp基因组的G + C含量为38.26%。基因组中共预测到128个基因,包括83个蛋白质编码基因、37个tRNA基因和8个rRNA基因。系统发育分析证实了[物种名称]与马鞭草科其他代表性物种之间的系统发育关系。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0635/8183526/56737aa77ecb/TMDN_A_1934164_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0635/8183526/56737aa77ecb/TMDN_A_1934164_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0635/8183526/56737aa77ecb/TMDN_A_1934164_F0001_B.jpg

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