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(本特姆)S. 摩尔(菊科)的完整叶绿体基因组序列。

The complete chloroplast genome sequence of (Benth.) S. Moore. (Asteraceae).

作者信息

Wei-Cai Song, Xiao-Fan Liu, Wang Shuo, Rui-Qing Zhang, Chao Shi, Zhang Yun-Jiao

机构信息

College of Marine Science and Biological Engineering, Qingdao University of Science and Technology, Qingdao, China.

Kunming Medical University Haiyuan College, Kunming, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jun 3;6(7):1834-1836. doi: 10.1080/23802359.2021.1934165.

Abstract

The complete chloroplast (cp) genome of was sequenced and assembled for the first time. In this study, the total genome size is 150,596 bp in length and demonstrates a typical quadripartite structure containing a large single copy (LSC, 82,575 bp) and a small single copy (SSC, 18,293 bp), separated by a pair of inverted repeats (IRa, IRb) of 24,864 bp. The G + C content of this cp genome was 37.21%. Gene annotation analysis identified 130 genes including 85 protein-coding genes, 37 transfer RNA, and 8 ribosomal RNA genes. The maximum-likelihood phylogenetic analysis result showed that was closely related to in the phylogenetic relationship.

摘要

首次对[物种名称]的完整叶绿体(cp)基因组进行了测序和组装。在本研究中,基因组全长150,596 bp,呈现典型的四分体结构,包含一个大单拷贝(LSC,82,575 bp)和一个小单拷贝(SSC,18,293 bp),由一对24,864 bp的反向重复序列(IRa、IRb)隔开。该cp基因组的G + C含量为37.21%。基因注释分析确定了130个基因,包括85个蛋白质编码基因、37个转运RNA和8个核糖体RNA基因。最大似然系统发育分析结果表明,在系统发育关系上,[物种名称]与[另一物种名称]密切相关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/7399/8183548/2c57509770af/TMDN_A_1934165_F0001_B.jpg

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