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菊科(Asteraceae)某植物的完整叶绿体基因组序列及与相关物种的系统发育分析。

Complete chloroplast genome sequence of (Asteraceae) and phylogenetic analysis with related species.

作者信息

Xia Mingze, Li Yan

机构信息

Key Laboratory of Adaptation and Evolution of Plateau Biota, Northwest Institute of Plateau Biology, Chinese Academy of Sciences, Xining, China.

University of Chinese Academy of Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2021 Jul 6;6(8):2134-2136. doi: 10.1080/23802359.2021.1944369. eCollection 2021.

DOI:10.1080/23802359.2021.1944369
PMID:34286079
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8266254/
Abstract

is a perennial medical herb in the family Asteraceae. Here, we sequenced and analyzed the complete chloroplast genome of . The complete chloroplast genome size is 150,063 bp with a GC content of 37.63%. The chloroplast genome is a typical quadripartite structure, including a large single-copy region (LSC) of 82,017 bp and a small single-copy region (SSC) of 18,142 bp separated by a pair of inverted repeats (IRs) of 24,952 bp each. A total of 114 unique genes, including 29 tRNA genes, four rRNA genes, and 81 protein-coding genes were found in the chloroplast genome. Phylogenetic analysis revealed that is more closely related with .

摘要

是菊科的一种多年生药用草本植物。在此,我们对其完整叶绿体基因组进行了测序和分析。完整叶绿体基因组大小为150,063 bp,GC含量为37.63%。该叶绿体基因组是典型的四分体结构,包括一个82,017 bp的大单拷贝区域(LSC)和一个18,142 bp的小单拷贝区域(SSC),它们被两个各为24,952 bp的反向重复序列(IR)隔开。在叶绿体基因组中总共发现了114个独特基因,包括29个tRNA基因、4个rRNA基因和81个蛋白质编码基因。系统发育分析表明,与 关系更密切。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b77e/8266254/85c6c0982f5c/TMDN_A_1944369_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b77e/8266254/85c6c0982f5c/TMDN_A_1944369_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b77e/8266254/85c6c0982f5c/TMDN_A_1944369_F0001_B.jpg

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