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黑腹果蝇染色体倒位对气候变量的适应:阿瓦拉的巴尔干自然种群。

Adaptation of Drosophila subobscura chromosomal inversions to climatic variables: the Balkan natural population of Avala.

机构信息

Department of Genetics, Institute for Biological Research "Sinisa Stankovic" - National Institute of Republic of Serbia, University of Belgrade, Belgrade, Serbia.

Departament de Genètica, Microbiologia i Estadística, Secció d'Estadística, Universitat de Barcelona, Barcelona, Spain.

出版信息

Genetica. 2021 Jun;149(3):155-169. doi: 10.1007/s10709-021-00125-7. Epub 2021 Jun 15.

DOI:10.1007/s10709-021-00125-7
PMID:34129131
Abstract

The adaptive value of chromosomal inversions continues raising relevant questions in evolutionary biology. In many species of the Drosophila genus, different inversions have been recognized to be related to thermal adaptation, but it is necessary to determine to which specific climatic variables the inversions are adaptive. With this aim, the behavior of thermal adapted inversions of Drosophila subobscura regarding climatic variables was studied in the natural population of Avala (Serbia) during the 2014-2017 period. The results obtained were compared with those previously reported in the Font Groga (Barcelona, Spain) population, which presents different climatic and environmental conditions. In both populations, it was observed that most thermal adapted inversions were significantly associated with the first, second or both principal components, which were related with maximum, minimum and mean temperatures. Moreover, a significant increase over years (2004-2017) for the minimum temperature was detected. In parallel, a significant variation over time in Avala was only observed for the frequencies of 'warm' and 'non-thermal' adapted inversions of the U chromosome. However, stability in the chromosomal inversion polymorphism was observed for the 2014-2017 period which might result from the temporal span of the study and/or selective process acting on the population.

摘要

染色体倒位的适应价值在进化生物学中不断引发相关问题。在果蝇属的许多物种中,已经发现不同的倒位与热适应有关,但需要确定倒位适应的是哪些特定的气候变量。为此,在 2014-2017 年期间,在塞尔维亚阿瓦拉(Avala)的自然种群中研究了果蝇 subobscura 的热适应倒位与气候变量之间的关系。所获得的结果与以前在西班牙巴塞罗那的丰特格罗加(Font Groga)种群中报道的结果进行了比较,该种群具有不同的气候和环境条件。在这两个种群中,观察到大多数热适应的倒位与第一、第二或两个主成分显著相关,这些主成分与最高温度、最低温度和平均温度有关。此外,还检测到最低温度在过去几年中(2004-2017 年)显著增加。同时,仅在阿瓦拉观察到 U 染色体上的“温暖”和“非热”适应倒位的频率随时间发生显著变化。然而,在 2014-2017 年期间,染色体倒位多态性保持稳定,这可能是由于研究的时间跨度和/或对种群起作用的选择过程。

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本文引用的文献

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The Cyclically Seasonal Inversion O Originated From Fragile Genomic Sites and Relocated Immunity and Metabolic Genes.周期性季节性倒置起源于脆弱的基因组位点并重新定位免疫和代谢基因。
Front Genet. 2020 Oct 9;11:565836. doi: 10.3389/fgene.2020.565836. eCollection 2020.
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Rate of change for the thermal adapted inversions in Drosophila subobscura.果蝇(Drosophila subobscura)中热适应性倒位的变化率。
Genetica. 2019 Dec;147(5-6):401-409. doi: 10.1007/s10709-019-00078-y. Epub 2019 Oct 17.
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Long-read based assembly and synteny analysis of a reference Drosophila subobscura genome reveals signatures of structural evolution driven by inversions recombination-suppression effects.
Insects. 2023 Jul 1;14(7):596. doi: 10.3390/insects14070596.
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Widespread chromosomal rearrangements preceded genetic divergence in a monitor lizard, Varanus acanthurus (Varanidae).广泛的染色体重排先于巨蜥属(Varanidae)的monitor lizard , Varanus acanthurus 的遗传分化。
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基于长读长测序的参考果蝇亚种 obscura 基因组组装和共线性分析揭示了由倒位重组抑制效应驱动的结构进化特征。
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Origin and Consequences of Chromosomal Inversions in the virilis Group of Drosophila.果蝇 virilis 组中染色体倒位的起源和后果。
Genome Biol Evol. 2018 Dec 1;10(12):3152-3166. doi: 10.1093/gbe/evy239.
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The adaptive significance of chromosomal inversion polymorphisms in Drosophila melanogaster.黑腹果蝇中染色体倒位多态性的适应意义。
Mol Ecol. 2019 Mar;28(6):1263-1282. doi: 10.1111/mec.14871. Epub 2018 Nov 3.
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Climatic adaptation of chromosomal inversions in Drosophila subobscura.果蝇(Drosophila subobscura)染色体倒位的气候适应性
Genetica. 2018 Oct;146(4-5):433-441. doi: 10.1007/s10709-018-0035-x. Epub 2018 Aug 27.
7
Ancestral polymorphisms explain the role of chromosomal inversions in speciation.祖先多态性解释了染色体倒位在物种形成中的作用。
PLoS Genet. 2018 Jul 30;14(7):e1007526. doi: 10.1371/journal.pgen.1007526. eCollection 2018 Jul.
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An inversion supergene in Drosophila underpins latitudinal clines in survival traits.果蝇中的反式基因控制着生存性状的纬度梯度。
J Evol Biol. 2018 Sep;31(9):1354-1364. doi: 10.1111/jeb.13310. Epub 2018 Jun 28.
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Chromosomal Thermal Index: a comprehensive way to integrate the thermal adaptation of Drosophila subobscura whole karyotype.染色体热指数:综合整合黑腹果蝇全染色体热适应的方法。
Genome. 2018 Feb;61(2):73-78. doi: 10.1139/gen-2017-0124. Epub 2017 Nov 30.
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Trans-oceanic genomic divergence of Atlantic cod ecotypes is associated with large inversions.大西洋鳕鱼生态型的跨洋基因组分化与大型倒位有关。
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