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哮喘中衰老相关基因的异常甲基化

Aberrant Methylation of Aging-Related Genes in Asthma.

作者信息

Yang Yu, Yuan Lin, Yang Ming, Du Xizi, Qin Ling, Wang Leyuan, Zhou Kai, Wu Mengping, He Ruoxi, Feng Juntao, Xiang Yang, Qu Xiangping, Liu Huijun, Qin Xiaoqun, Liu Chi

机构信息

Department of Respiratory Medicine, National Clinical Research Center for Respiratory Diseases, Xiangya Hospital, Central South University, Changsha, China.

Department of Physiology, School of Basic Medicine Science, Central South University, Changsha, China.

出版信息

Front Mol Biosci. 2021 May 25;8:655285. doi: 10.3389/fmolb.2021.655285. eCollection 2021.

Abstract

Asthma is a complex pulmonary inflammatory disease which is common among older adults. Aging-related alterations have also been found in structural cells and immune cells of asthma patients. Nonetheless, the underlying mechanism by which differenced aging-related gene contributes to asthma pathology remains unclear. Of note, DNA methylation (DNAm) has been proven to play a critical mechanism for age-related gene expression changes. However, the methylation changes of aging-related genes in asthma patients are still obscure. First, changes in DNAm and gene expression were detected with multiple targeted bisulfite enrichment sequencing (MethTarget) and qPCR in peripheral blood of 51 healthy controls (HCs) and 55 asthmatic patients. Second, the correlation between the DNAm levels of specific altered CpG sites and the pulmonary function indicators of asthma patients was evaluated. Last, the receiver operator characteristic (ROC) curve and principal component analysis (PCA) were used to identify the feasibility of the candidate CpG sites as biomarkers for asthma. Compared with HCs, there was a differential mRNA expression for nine aging-related genes in peripheral blood of asthma patients. Besides, the methylation levels of the nine aging-related genes were also altered in asthma patients, and a total of 68 CpG sites were associated with the severity of asthma. Notably, 9 of the 68 CpG sites were significantly associated with pulmonary function parameters. Moreover, ROC curve and PCA analysis showed that the candidate differential methylation sites (DMSs) can be used as potential biomarkers for asthma. In summary, this study confirmed the differentially expressed mRNA and aberrant DNAm level of aging-related genes in asthma patients. DMSs are associated with the clinical evaluation indicators of asthma, which indicate the involvement of aging-related genes in the pathogenesis of asthma and provide some new possible biomarkers for asthma.

摘要

哮喘是一种复杂的肺部炎症性疾病,在老年人中很常见。在哮喘患者的结构细胞和免疫细胞中也发现了与衰老相关的改变。然而,不同的衰老相关基因导致哮喘病理的潜在机制仍不清楚。值得注意的是,DNA甲基化(DNAm)已被证明在与年龄相关的基因表达变化中起关键作用。然而,哮喘患者中衰老相关基因的甲基化变化仍然不清楚。首先,采用多重靶向亚硫酸氢盐富集测序(MethTarget)和qPCR检测了51名健康对照者(HCs)和55名哮喘患者外周血中的DNAm和基因表达变化。其次,评估了特定改变的CpG位点的DNAm水平与哮喘患者肺功能指标之间的相关性。最后,使用受试者工作特征(ROC)曲线和主成分分析(PCA)来确定候选CpG位点作为哮喘生物标志物的可行性。与HCs相比,哮喘患者外周血中9个衰老相关基因的mRNA表达存在差异。此外,哮喘患者中9个衰老相关基因的甲基化水平也发生了改变,共有68个CpG位点与哮喘的严重程度相关。值得注意的是,68个CpG位点中有9个与肺功能参数显著相关。此外,ROC曲线和PCA分析表明,候选差异甲基化位点(DMSs)可作为哮喘的潜在生物标志物。总之,本研究证实了哮喘患者中衰老相关基因的mRNA表达差异和异常的DNAm水平。DMSs与哮喘的临床评估指标相关,这表明衰老相关基因参与了哮喘的发病机制,并为哮喘提供了一些新的可能的生物标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a8de/8203316/7a232324ef3d/fmolb-08-655285-g001.jpg

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