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硫酸博莱霉素 S 抑制哺乳动物翻译并增强无义 mRNA 编码的蛋白质的产生。

Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.

机构信息

University of Bristol, School of Biochemistry, University Walk, Bristol BS8 1TD, UK.

Department of Pediatric Oncology, Hematology and Immunology, Hopp Children's Cancer Research Center Heidelberg (KiTZ), University of Heidelberg, Heidelberg, Germany.

出版信息

Nucleic Acids Res. 2021 Jul 21;49(13):7665-7679. doi: 10.1093/nar/gkab532.


DOI:10.1093/nar/gkab532
PMID:34157102
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC8287960/
Abstract

Deciphering translation is of paramount importance for the understanding of many diseases, and antibiotics played a pivotal role in this endeavour. Blasticidin S (BlaS) targets translation by binding to the peptidyl transferase center of the large ribosomal subunit. Using biochemical, structural and cellular approaches, we show here that BlaS inhibits both translation elongation and termination in Mammalia. Bound to mammalian terminating ribosomes, BlaS distorts the 3'CCA tail of the P-site tRNA to a larger extent than previously reported for bacterial ribosomes, thus delaying both, peptide bond formation and peptidyl-tRNA hydrolysis. While BlaS does not inhibit stop codon recognition by the eukaryotic release factor 1 (eRF1), it interferes with eRF1's accommodation into the peptidyl transferase center and subsequent peptide release. In human cells, BlaS inhibits nonsense-mediated mRNA decay and, at subinhibitory concentrations, modulates translation dynamics at premature termination codons leading to enhanced protein production.

摘要

破译翻译对于理解许多疾病至关重要,而抗生素在这方面发挥了关键作用。硫酸博来霉素(BlaS)通过结合核糖体大亚基的肽基转移酶中心来靶向翻译。在这里,我们使用生化、结构和细胞方法表明,BlaS 抑制哺乳类翻译的延伸和终止。与哺乳动物终止核糖体结合,BlaS 将 P 位 tRNA 的 3'CCA 尾巴扭曲到比以前报道的细菌核糖体更大的程度,从而延迟肽键形成和肽酰-tRNA 水解。虽然 BlaS 不抑制真核释放因子 1(eRF1)识别终止密码子,但它干扰 eRF1 进入肽基转移酶中心的适应和随后的肽释放。在人类细胞中,BlaS 抑制无意义介导的 mRNA 降解,并且在亚抑制浓度下,调节过早终止密码子处的翻译动力学,导致蛋白质产量增加。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/7fc8268f579e/gkab532fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/890f8ef9a46b/gkab532fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/c44f0ab895e3/gkab532fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/ba5bbef96873/gkab532fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/504ae654cb2a/gkab532fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/7fc8268f579e/gkab532fig5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/890f8ef9a46b/gkab532fig1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/c44f0ab895e3/gkab532fig2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/ba5bbef96873/gkab532fig3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/504ae654cb2a/gkab532fig4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/991b/8287960/7fc8268f579e/gkab532fig5.jpg

相似文献

[1]
Blasticidin S inhibits mammalian translation and enhances production of protein encoded by nonsense mRNA.

Nucleic Acids Res. 2021-7-21

[2]
Blasticidin S inhibits translation by trapping deformed tRNA on the ribosome.

Proc Natl Acad Sci U S A. 2013-7-3

[3]
Mechanistic insights into the alternative translation termination by ArfA and RF2.

Nature. 2016-12-1

[4]
tRNA mimicry in translation termination and beyond.

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[5]
Structure of a human translation termination complex.

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[6]
Mechanism of Inhibition of Translation Termination by Blasticidin S.

J Mol Biol. 2018-3-2

[7]
Structural basis for the inhibition of the eukaryotic ribosome.

Nature. 2014-9-10

[8]
Exploring contacts of eRF1 with the 3'-terminus of the P site tRNA and mRNA stop signal in the human ribosome at various translation termination steps.

Biochim Biophys Acta Gene Regul Mech. 2017-4-27

[9]
Structural basis for translation termination on the 70S ribosome.

Nature. 2008-8-14

[10]
Chemical footprinting reveals conformational changes of 18S and 28S rRNAs at different steps of translation termination on the human ribosome.

RNA. 2016-2

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[3]
Molecular basis of the pleiotropic effects by the antibiotic amikacin on the ribosome.

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[4]
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J Fungi (Basel). 2023-5-26

[5]
BeEM: fast and faithful conversion of mmCIF format structure files to PDB format.

BMC Bioinformatics. 2023-6-20

[6]
Semisynthetic blasticidin S ester derivatives show enhanced antibiotic activity.

RSC Med Chem. 2023-3-8

[7]
No-nonsense: insights into the functional interplay of nonsense-mediated mRNA decay factors.

Biochem J. 2022-5-13

[8]
A cotransformation system of the unicellular red alga Cyanidioschyzon merolae with blasticidin S deaminase and chloramphenicol acetyltransferase selectable markers.

BMC Plant Biol. 2021-12-4

[9]
Inhibition of the Eukaryotic 80S Ribosome as a Potential Anticancer Therapy: A Structural Perspective.

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本文引用的文献

[1]
Poly(A)-Binding Protein Regulates the Efficiency of Translation Termination.

Cell Rep. 2020-11-17

[2]
CTELS: A Cell-Free System for the Analysis of Translation Termination Rate.

Biomolecules. 2020-6-16

[3]
Mechanism of ribosome stalling during translation of a poly(A) tail.

Nat Struct Mol Biol. 2019-11-25

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Quality and quantity control of gene expression by nonsense-mediated mRNA decay.

Nat Rev Mol Cell Biol. 2019-7

[5]
ZNF598 Is a Quality Control Sensor of Collided Ribosomes.

Mol Cell. 2018-10-4

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Nonsense-Mediated mRNA Decay Begins Where Translation Ends.

Cold Spring Harb Perspect Biol. 2019-2-1

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Conformational Control of Translation Termination on the 70S Ribosome.

Structure. 2018-5-3

[8]
Ribosome-Targeting Antibiotics: Modes of Action, Mechanisms of Resistance, and Implications for Drug Design.

Annu Rev Biochem. 2018-3-23

[9]
Mechanism of Inhibition of Translation Termination by Blasticidin S.

J Mol Biol. 2018-3-2

[10]
MolProbity: More and better reference data for improved all-atom structure validation.

Protein Sci. 2018-1

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